1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT2G41690

AT2G41690 (AT-HSFB3, HSFB3)


Aliases : AT-HSFB3, HSFB3

Description : heat shock transcription factor B3


Gene families : OG0000093 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000093_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G41690

Target Alias Description ECC score Gene Family Method Actions
AT1G77570 No alias Winged helix-turn-helix transcription repressor DNA-binding 0.06 OrthoFinder output from all 47 species
AT3G24520 AT-HSFC1, HSFC1 heat shock transcription factor C1 0.04 OrthoFinder output from all 47 species
AT4G36990 HSF4, HSFB1,... heat shock factor 4 0.05 OrthoFinder output from all 47 species
Als_g07805 ATHSF1, HSF1,... HSF-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g08951 HSFA1B, ATHSF3,... HSF-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Aob_g32376 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene45768.t1 HSFB4, SCZ,... HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene69372.t1 ATHSF1, HSF1,... HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.09G066500.1 HSFB4, SCZ,... HSF-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.22G003800.1 HSFB4, SCZ,... HSF-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g22001 AT-HSFA6B, HSFA6B HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g03864 HSFA1B, ATHSF3,... HSF-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g35911 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01002066001 AT-HSFB2A, HSFB2A RNA biosynthesis.transcriptional activation.HSF (heat... 0.05 OrthoFinder output from all 47 species
GSVIVT01018041001 AT-HSFA6B, HSFA6B RNA biosynthesis.transcriptional activation.HSF (heat... 0.06 OrthoFinder output from all 47 species
GSVIVT01033257001 AT-HSFB3, HSFB3 RNA biosynthesis.transcriptional activation.HSF (heat... 0.05 OrthoFinder output from all 47 species
Gb_14573 HSFB4, SCZ, AT-HSFB4 transcription factor (HSF) 0.03 OrthoFinder output from all 47 species
LOC_Os03g06630.1 AT-HSFA6B,... transcription factor (HSF) 0.03 OrthoFinder output from all 47 species
LOC_Os09g28354.1 HSF4, HSFB1,... transcription factor (HSF) 0.03 OrthoFinder output from all 47 species
Len_g28547 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_110587g0010 HSFB4, SCZ, AT-HSFB4 transcription factor (HSF) 0.03 OrthoFinder output from all 47 species
MA_113508g0010 HSFB4, SCZ, AT-HSFB4 transcription factor (HSF) 0.06 OrthoFinder output from all 47 species
MA_13910g0010 HSFB4, SCZ, AT-HSFB4 transcription factor (HSF) 0.06 OrthoFinder output from all 47 species
MA_8812600g0010 HSFB4, SCZ, AT-HSFB4 transcription factor (HSF) 0.03 OrthoFinder output from all 47 species
MA_8845456g0010 HSFB4, SCZ, AT-HSFB4 transcription factor (HSF) 0.03 OrthoFinder output from all 47 species
MA_8992661g0010 HSFB4, SCZ, AT-HSFB4 transcription factor (HSF) 0.03 OrthoFinder output from all 47 species
MA_9434330g0010 HSFB4, SCZ, AT-HSFB4 transcription factor (HSF) 0.03 OrthoFinder output from all 47 species
Pir_g26208 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g51248 AT-HSFC1, HSFC1 HSF-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g09931 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g21944 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30272 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g12831 AT-HSFA6B, HSFA6B HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13332 HSFA1E, ATHSFA1E HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g57933 AT-HSFA6B, HSFA6B HSF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Smo93081 ATHSFA1D, HSFA1D RNA biosynthesis.transcriptional activation.HSF (heat... 0.04 OrthoFinder output from all 47 species
Solyc02g072060.3.1 HSFA2, ATHSFA2,... transcription factor (HSF) 0.02 OrthoFinder output from all 47 species
Solyc04g016000.3.1 AT-HSFB3, HSFB3,... transcription factor (HSF) 0.06 OrthoFinder output from all 47 species
Solyc06g053950.3.1 AT-HSFA6B,... no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc12g007070.2.1 AT-HSFC1, HSFC1,... transcription factor (HSF) 0.06 OrthoFinder output from all 47 species
Spa_g28879 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g55869 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e027464_P001 HSF A4A,... transcription factor (HSF) 0.03 OrthoFinder output from all 47 species
Zm00001e037244_P001 AT-HSFC1, HSFC1,... transcription factor (HSF) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0009407 toxin catabolic process RCA Interproscan
BP GO:0046686 response to cadmium ion IEP Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009690 cytokinin metabolic process IEP HCCA
BP GO:0009691 cytokinin biosynthetic process IEP HCCA
BP GO:0009692 ethylene metabolic process IEP HCCA
BP GO:0009693 ethylene biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
BP GO:0042446 hormone biosynthetic process IEP HCCA
BP GO:0043449 cellular alkene metabolic process IEP HCCA
BP GO:0043450 alkene biosynthetic process IEP HCCA
BP GO:0120251 hydrocarbon biosynthetic process IEP HCCA
BP GO:0120252 hydrocarbon metabolic process IEP HCCA
BP GO:0120254 olefinic compound metabolic process IEP HCCA
BP GO:0120255 olefinic compound biosynthetic process IEP HCCA
BP GO:1900673 olefin metabolic process IEP HCCA
BP GO:1900674 olefin biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000232 HSF_DNA-bd 41 130
No external refs found!