Description : CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT4G35170.1); Has 172 Blast hits to 168 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 172; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Gene families : OG0001442 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001442_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT2G41990 | |
| Cluster | HCCA: Cluster_53 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00022p00252730 | evm_27.TU.AmTr_v1... | No description available | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g12307 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g45629 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g00454 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01032090001 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
| Gb_09110 | No alias | microtubule-interacting component CC of cellulose... | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c16_7260V3.1 | Pp3c16_7260 | Late embryogenesis abundant (LEA) hydroxyproline-rich... | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g62547 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e015379_P001 | Zm00001e015379 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | ND | Interproscan |
| CC | GO:0005575 | cellular_component | ND | Interproscan |
| BP | GO:0008150 | biological_process | ND | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000280 | nuclear division | IEP | HCCA |
| MF | GO:0004568 | chitinase activity | IEP | HCCA |
| MF | GO:0005342 | organic acid transmembrane transporter activity | IEP | HCCA |
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0006260 | DNA replication | IEP | HCCA |
| BP | GO:0006261 | DNA-templated DNA replication | IEP | HCCA |
| BP | GO:0006312 | mitotic recombination | IEP | HCCA |
| BP | GO:0007051 | spindle organization | IEP | HCCA |
| BP | GO:0007129 | homologous chromosome pairing at meiosis | IEP | HCCA |
| MF | GO:0008170 | N-methyltransferase activity | IEP | HCCA |
| MF | GO:0008276 | protein methyltransferase activity | IEP | HCCA |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | HCCA |
| BP | GO:0009624 | response to nematode | IEP | HCCA |
| BP | GO:0009900 | dehiscence | IEP | HCCA |
| BP | GO:0009901 | anther dehiscence | IEP | HCCA |
| BP | GO:0010051 | xylem and phloem pattern formation | IEP | HCCA |
| BP | GO:0010389 | regulation of G2/M transition of mitotic cell cycle | IEP | HCCA |
| BP | GO:0010500 | transmitting tissue development | IEP | HCCA |
| BP | GO:0010588 | cotyledon vascular tissue pattern formation | IEP | HCCA |
| MF | GO:0015171 | amino acid transmembrane transporter activity | IEP | HCCA |
| MF | GO:0016278 | lysine N-methyltransferase activity | IEP | HCCA |
| MF | GO:0016279 | protein-lysine N-methyltransferase activity | IEP | HCCA |
| MF | GO:0018024 | histone lysine N-methyltransferase activity | IEP | HCCA |
| BP | GO:0022402 | cell cycle process | IEP | HCCA |
| BP | GO:0022414 | reproductive process | IEP | HCCA |
| MF | GO:0042054 | histone methyltransferase activity | IEP | HCCA |
| BP | GO:0042138 | meiotic DNA double-strand break formation | IEP | HCCA |
| BP | GO:0042631 | cellular response to water deprivation | IEP | HCCA |
| MF | GO:0046910 | pectinesterase inhibitor activity | IEP | HCCA |
| MF | GO:0046943 | carboxylic acid transmembrane transporter activity | IEP | HCCA |
| MF | GO:0046976 | histone H3K27 methyltransferase activity | IEP | HCCA |
| BP | GO:0048285 | organelle fission | IEP | HCCA |
| BP | GO:0048438 | floral whorl development | IEP | HCCA |
| BP | GO:0048467 | gynoecium development | IEP | HCCA |
| BP | GO:0048829 | root cap development | IEP | HCCA |
| BP | GO:0051225 | spindle assembly | IEP | HCCA |
| BP | GO:0070192 | chromosome organization involved in meiotic cell cycle | IEP | HCCA |
| BP | GO:0070417 | cellular response to cold | IEP | HCCA |
| BP | GO:0070734 | histone H3-K27 methylation | IEP | HCCA |
| BP | GO:0070925 | organelle assembly | IEP | HCCA |
| BP | GO:0071229 | cellular response to acid chemical | IEP | HCCA |
| BP | GO:0071462 | cellular response to water stimulus | IEP | HCCA |
| BP | GO:0140694 | non-membrane-bounded organelle assembly | IEP | HCCA |
| MF | GO:0140938 | histone H3 methyltransferase activity | IEP | HCCA |
| BP | GO:1901987 | regulation of cell cycle phase transition | IEP | HCCA |
| BP | GO:1901990 | regulation of mitotic cell cycle phase transition | IEP | HCCA |
| BP | GO:1902749 | regulation of cell cycle G2/M phase transition | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004864 | LEA_2 | 180 | 266 |
| No external refs found! |
