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AT2G43490


Description : Ypt/Rab-GAP domain of gyp1p superfamily protein


Gene families : OG0006288 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006288_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G43490
Cluster HCCA: Cluster_91

Target Alias Description ECC score Gene Family Method Actions
Gb_35832 No alias RAB-GTPase-activating protein (RAB-GAP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005794 Golgi apparatus ISM Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003725 double-stranded RNA binding IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
BP GO:0009738 abscisic acid-activated signaling pathway IEP HCCA
BP GO:0009890 negative regulation of biosynthetic process IEP HCCA
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0022412 cellular process involved in reproduction in multicellular organism IEP HCCA
BP GO:0031327 negative regulation of cellular biosynthetic process IEP HCCA
BP GO:0045892 negative regulation of DNA-templated transcription IEP HCCA
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0048235 pollen sperm cell differentiation IEP HCCA
BP GO:0051253 negative regulation of RNA metabolic process IEP HCCA
BP GO:1902679 negative regulation of RNA biosynthetic process IEP HCCA
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP HCCA
InterPro domains Description Start Stop
IPR000195 Rab-GTPase-TBC_dom 358 504
No external refs found!