1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT2G44380

AT2G44380


Description : Cysteine/Histidine-rich C1 domain family protein


Gene families : OG0000892 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000892_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G44380
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00263580 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00022p00034890 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00030p00098310 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00059p00175720 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT2G17740 No alias Cysteine/Histidine-rich C1 domain family protein 0.07 OrthoFinder output from all 47 species
AT2G27660 No alias Cysteine/Histidine-rich C1 domain family protein 0.08 OrthoFinder output from all 47 species
AT2G28270 No alias Cysteine/Histidine-rich C1 domain family protein 0.02 OrthoFinder output from all 47 species
AT2G37780 No alias Cysteine/Histidine-rich C1 domain family protein 0.04 OrthoFinder output from all 47 species
AT2G37805 No alias No description available 0.04 OrthoFinder output from all 47 species
AT2G37810 No alias Cysteine/Histidine-rich C1 domain family protein 0.03 OrthoFinder output from all 47 species
AT2G44370 No alias Cysteine/Histidine-rich C1 domain family protein 0.04 OrthoFinder output from all 47 species
Adi_g057572 No alias E3 ubiquitin ligase *(AIRP1) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g18622 No alias E3 ubiquitin ligase *(AIRP1) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene59532.t1 Aspi01Gene59532 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0408.g068454 No alias not classified & original description: CDS=95-1408 0.04 OrthoFinder output from all 47 species
Cba_g00917 No alias E3 ubiquitin ligase *(AIRP1) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.18G064000.1 Ceric.18G064000 E3 ubiquitin ligase *(AIRP1) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.21G084100.1 Ceric.21G084100 not classified & original description: pacid=50602659... 0.03 OrthoFinder output from all 47 species
Ceric.33G006500.1 Ceric.33G006500 E3 ubiquitin ligase *(AIRP1) & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g10367 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g01391 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01031897001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01034093001 No alias No description available 0.06 OrthoFinder output from all 47 species
Gb_35538 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os01g68460.1 LOC_Os01g68460 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os07g41890.1 LOC_Os07g41890 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os07g41910.1 LOC_Os07g41910 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os07g42070.1 LOC_Os07g42070 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os08g31250.1 LOC_Os08g31250 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g09590 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_18827g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_18827g0020 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_251691g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g09555 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g44989 No alias E3 ubiquitin ligase *(AIRP1) & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g55965 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004401 No alias not classified & original description: CDS=1-1194 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0063.g015605 No alias not classified & original description: CDS=1-1329 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0128.g021903 No alias not classified & original description: CDS=1921-2982 0.03 OrthoFinder output from all 47 species
Solyc01g073780.2.1 Solyc01g073780 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc01g073820.4.1 Solyc01g073820 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc01g073840.1.1 Solyc01g073840 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc01g073860.3.1 Solyc01g073860 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc01g073890.3.1 Solyc01g073890 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc02g068680.1.1 Solyc02g068680 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc06g072460.1.1 Solyc06g072460 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc09g011260.2.1 Solyc09g011260 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g08224 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g19130 RHB1A E3 ubiquitin ligase *(AIRP1) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e021370_P001 Zm00001e021370 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
BP GO:0010167 response to nitrate RCA Interproscan
BP GO:0015706 nitrate transmembrane transport RCA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
BP GO:0002252 immune effector process IEP HCCA
BP GO:0002679 respiratory burst involved in defense response IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006826 iron ion transport IEP HCCA
BP GO:0006865 amino acid transport IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0010106 cellular response to iron ion starvation IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0019825 oxygen binding IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0045730 respiratory burst IEP HCCA
InterPro domains Description Start Stop
IPR004146 DC1 71 118
IPR004146 DC1 129 181
IPR004146 DC1 16 61
No external refs found!