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  5. AT2G44740

AT2G44740 (CYCP4;1)


Aliases : CYCP4;1

Description : cyclin p4;1


Gene families : OG0000303 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000303_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G44740
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
AT2G45080 cycp3;1 cyclin p3;1 0.02 OrthoFinder output from all 47 species
Ala_g15122 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Ala_g16985 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Als_g21897 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Als_g27688 CYCP2;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Als_g37867 CYCP2;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Aop_g14532 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Aop_g53981 cycp3;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene30001.t1 CYCP4;1, Aspi01Gene30001 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene48169.t1 CYCP2;1, Aspi01Gene48169 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0060.g034840 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0084.g039008 CYCP2;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Ceric.07G089100.1 CYCP3;2, Ceric.07G089100 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Ceric.09G096500.1 CYCP4;1, Ceric.09G096500 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Ceric.10G034800.1 CYCP2;1, Ceric.10G034800 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Ceric.17G024900.1 CYCP4;1, Ceric.17G024900 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Ceric.21G011000.1 CYCP4;1, Ceric.21G011000 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Ceric.31G015200.1 CYCP3;2, Ceric.31G015200 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Gb_27223 CYCP3;2 cyclin (CYCP) 0.04 OrthoFinder output from all 47 species
Gb_39399 CYCP4;1 cyclin (CYCP) 0.03 OrthoFinder output from all 47 species
LOC_Os02g03294.1 CYCP4;1, LOC_Os02g03294 cyclin (CYCP) 0.05 OrthoFinder output from all 47 species
LOC_Os04g46660.1 cycp3;1, LOC_Os04g46660 cyclin (CYCP) 0.04 OrthoFinder output from all 47 species
Len_g03235 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Lfl_g00807 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Lfl_g38253 CYCP3;2 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
MA_57087g0010 cycp3;1 cyclin (CYCP) 0.05 OrthoFinder output from all 47 species
Msp_g13145 CYCP2;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Nbi_g07460 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Ore_g08217 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Ore_g22726 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Ore_g24433 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.06 OrthoFinder output from all 47 species
Ore_g28947 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Pnu_g10155 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Ppi_g00643 CYCP2;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Ppi_g07325 CYCP3;2 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Ppi_g13236 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Ppi_g29737 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Ppi_g62553 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0217.g026066 cycp3;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Sam_g12163 No alias regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Sam_g16477 No alias regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Solyc01g090800.3.1 CYCP3;2, Solyc01g090800 cyclin (CYCP) 0.04 OrthoFinder output from all 47 species
Solyc03g093790.3.1 CYCP4;1, Solyc03g093790 cyclin (CYCP) 0.03 OrthoFinder output from all 47 species
Solyc07g052610.3.1 CYCP2;1, Solyc07g052610 cyclin (CYCP) 0.03 OrthoFinder output from all 47 species
Spa_g03908 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Spa_g19007 CYCP2;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Spa_g39740 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Tin_g05449 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Tin_g27209 cycp3;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.08 OrthoFinder output from all 47 species
Zm00001e007314_P001 cycp3;1, Zm00001e007314 cyclin (CYCP) 0.02 OrthoFinder output from all 47 species
Zm00001e007371_P002 CYCP4;3, Zm00001e007371 cyclin (CYCP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004693 cyclin-dependent protein serine/threonine kinase activity ISS Interproscan
MF GO:0005515 protein binding IPI Interproscan
BP GO:0010440 stomatal lineage progression RCA Interproscan
BP GO:0051726 regulation of cell cycle ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005768 endosome IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006534 cysteine metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0007166 cell surface receptor signaling pathway IEP HCCA
BP GO:0007167 enzyme-linked receptor protein signaling pathway IEP HCCA
BP GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009070 serine family amino acid biosynthetic process IEP HCCA
CC GO:0009505 plant-type cell wall IEP HCCA
CC GO:0009531 secondary cell wall IEP HCCA
BP GO:0009914 hormone transport IEP HCCA
BP GO:0009926 auxin polar transport IEP HCCA
BP GO:0010053 root epidermal cell differentiation IEP HCCA
BP GO:0010218 response to far red light IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0019344 cysteine biosynthetic process IEP HCCA
BP GO:0021700 developmental maturation IEP HCCA
CC GO:0031410 cytoplasmic vesicle IEP HCCA
CC GO:0031982 vesicle IEP HCCA
BP GO:0048469 cell maturation IEP HCCA
BP GO:0048764 trichoblast maturation IEP HCCA
BP GO:0048765 root hair cell differentiation IEP HCCA
BP GO:0060918 auxin transport IEP HCCA
BP GO:0071695 anatomical structure maturation IEP HCCA
BP GO:0090627 plant epidermal cell differentiation IEP HCCA
CC GO:0097708 intracellular vesicle IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR013922 Cyclin_PHO80-like 25 147
No external refs found!