Description : unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; Has 39 Blast hits to 39 proteins in 18 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Gene families : OG0005276 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005276_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT2G44870 | |
| Cluster | HCCA: Cluster_117 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00048p00041290 | evm_27.TU.AmTr_v1... | No description available | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g078805 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g01401 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g14043 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dac_g08843 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os10g41940.1 | LOC_Os10g41940 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g04619 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g19843 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc07g005550.4.1 | Solyc07g005550 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g04768 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g01739 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e002404_P001 | Zm00001e002404 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | ND | Interproscan |
| BP | GO:0008150 | biological_process | ND | Interproscan |
| CC | GO:0009507 | chloroplast | IDA | Interproscan |
| CC | GO:0009507 | chloroplast | ISM | Interproscan |
| CC | GO:0009536 | plastid | IDA | Interproscan |
| BP | GO:0010027 | thylakoid membrane organization | RCA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0004518 | nuclease activity | IEP | HCCA |
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0006281 | DNA repair | IEP | HCCA |
| BP | GO:0006289 | nucleotide-excision repair | IEP | HCCA |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
| MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | HCCA |
| BP | GO:0033554 | cellular response to stress | IEP | HCCA |
| BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |
