Description : ARID/BRIGHT DNA-binding domain;ELM2 domain protein
Gene families : OG0001311 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001311_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT2G46040 | |
| Cluster | HCCA: Cluster_17 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Solyc03g115440.3.1 | Solyc03g115440 | AT-rich interactive domain-containing protein 2... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g014170.3.1 | GYRB3, Solyc09g014170 | AT-rich interactive domain-containing protein 2... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | ISS | Interproscan |
| CC | GO:0005622 | intracellular anatomical structure | ISS | Interproscan |
| CC | GO:0005634 | nucleus | ISM | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| BP | GO:0006304 | DNA modification | IEP | HCCA |
| BP | GO:0006305 | DNA alkylation | IEP | HCCA |
| BP | GO:0006306 | DNA methylation | IEP | HCCA |
| BP | GO:0006346 | DNA methylation-dependent heterochromatin formation | IEP | HCCA |
| BP | GO:0007267 | cell-cell signaling | IEP | HCCA |
| MF | GO:0008080 | N-acetyltransferase activity | IEP | HCCA |
| MF | GO:0008375 | acetylglucosaminyltransferase activity | IEP | HCCA |
| BP | GO:0009616 | RNAi-mediated antiviral immune response | IEP | HCCA |
| BP | GO:0010050 | vegetative phase change | IEP | HCCA |
| BP | GO:0010267 | ta-siRNA processing | IEP | HCCA |
| MF | GO:0016407 | acetyltransferase activity | IEP | HCCA |
| MF | GO:0016410 | N-acyltransferase activity | IEP | HCCA |
| BP | GO:0016441 | post-transcriptional gene silencing | IEP | HCCA |
| CC | GO:0016592 | mediator complex | IEP | HCCA |
| MF | GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups | IEP | HCCA |
| BP | GO:0023052 | signaling | IEP | HCCA |
| BP | GO:0030422 | siRNA processing | IEP | HCCA |
| CC | GO:0031461 | cullin-RING ubiquitin ligase complex | IEP | HCCA |
| BP | GO:0031507 | heterochromatin formation | IEP | HCCA |
| BP | GO:0035194 | RNA-mediated post-transcriptional gene silencing | IEP | HCCA |
| BP | GO:0035196 | miRNA processing | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0044728 | DNA methylation or demethylation | IEP | HCCA |
| BP | GO:0051607 | defense response to virus | IEP | HCCA |
| BP | GO:0070828 | heterochromatin organization | IEP | HCCA |
| BP | GO:0070918 | regulatory ncRNA processing | IEP | HCCA |
| CC | GO:0080008 | Cul4-RING E3 ubiquitin ligase complex | IEP | HCCA |
| BP | GO:0140546 | defense response to symbiont | IEP | HCCA |
| BP | GO:0140718 | facultative heterochromatin formation | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001606 | ARID_dom | 57 | 131 |
| No external refs found! |
