AT2G46710

Description : Rho GTPase activating protein with PAK-box/P21-Rho-binding domain

Gene families : OG0000915 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000915_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G46710

Target	Alias	Description	ECC score	Gene Family Method
AT1G08340	No alias	Rho GTPase activating protein with PAK-box/P21-Rho-binding domain	0.06	OrthoFinder output from all 47 species
AT5G22400	No alias	Rho GTPase activating protein with PAK-box/P21-Rho-binding domain	0.03	OrthoFinder output from all 47 species
Ala_g02417	No alias	ROP-activating protein *(RopGAP) & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g15854	No alias	ROP-activating protein *(RopGAP) & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g05032	No alias	ROP-activating protein *(RopGAP) & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene06670.t1	Aspi01Gene06670	ROP-activating protein *(RopGAP) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene21330.t2	Aspi01Gene21330	ROP-activating protein *(RopGAP) & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.07G082200.1	Ceric.07G082200	ROP-activating protein *(RopGAP) & original description:...	0.04	OrthoFinder output from all 47 species
Ceric.28G020500.1	Ceric.28G020500	ROP-activating protein *(RopGAP) & original description:...	0.04	OrthoFinder output from all 47 species
Dac_g04225	No alias	ROP-activating protein *(RopGAP) & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g18912	No alias	ROP-activating protein *(RopGAP) & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01027410001	No alias	Multi-process regulation.Rop GTPase regulatory...	0.03	OrthoFinder output from all 47 species
GSVIVT01033865001	No alias	Multi-process regulation.Rop GTPase regulatory...	0.05	OrthoFinder output from all 47 species
GSVIVT01036109001	No alias	Multi-process regulation.Rop GTPase regulatory...	0.04	OrthoFinder output from all 47 species
LOC_Os01g73630.1	LOC_Os01g73630	ROP-activating protein (RopGAP)	0.06	OrthoFinder output from all 47 species
LOC_Os02g45600.1	LOC_Os02g45600	ROP-activating protein (RopGAP)	0.11	OrthoFinder output from all 47 species
LOC_Os07g22580.1	LOC_Os07g22580	ROP-activating protein (RopGAP)	0.03	OrthoFinder output from all 47 species
LOC_Os11g05540.1	LOC_Os11g05540	ROP-activating protein (RopGAP)	0.02	OrthoFinder output from all 47 species
LOC_Os12g05900.1	LOC_Os12g05900	ROP-activating protein (RopGAP)	0.03	OrthoFinder output from all 47 species
LOC_Os12g34840.1	LOC_Os12g34840	ROP-activating protein (RopGAP)	0.02	OrthoFinder output from all 47 species
Len_g08086	No alias	ROP-activating protein *(RopGAP) & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g39497	No alias	ROP-activating protein *(RopGAP) & original description: none	0.05	OrthoFinder output from all 47 species
MA_10436113g0010	No alias	ROP-activating protein (RopGAP)	0.05	OrthoFinder output from all 47 species
Nbi_g08581	No alias	ROP-activating protein *(RopGAP) & original description: none	0.06	OrthoFinder output from all 47 species
Ore_g10962	No alias	ROP-activating protein *(RopGAP) & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g42992	No alias	ROP-activating protein *(RopGAP) & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g03481	No alias	ROP-activating protein *(RopGAP) & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g30150	No alias	ROP-activating protein *(RopGAP) & original description: none	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005777	No alias	ROP-activating protein *(RopGAP) & original description:...	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0040.g012358	No alias	ROP-activating protein *(RopGAP) & original description:...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0074.g017279	No alias	ROP-activating protein *(RopGAP) & original description:...	0.03	OrthoFinder output from all 47 species
Sam_g02926	No alias	ROP-activating protein *(RopGAP) & original description: none	0.02	OrthoFinder output from all 47 species
Smo13019	No alias	Multi-process regulation.Rop GTPase regulatory...	0.05	OrthoFinder output from all 47 species
Spa_g45662	No alias	ROP-activating protein *(RopGAP) & original description: none	0.04	OrthoFinder output from all 47 species
Tin_g04660	No alias	ROP-activaTing protein *(RopGAP) & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e007181_P002	Zm00001e007181	ROP-activating protein (RopGAP)	0.03	OrthoFinder output from all 47 species
Zm00001e018302_P003	Zm00001e018302	ROP-activating protein (RopGAP)	0.02	OrthoFinder output from all 47 species
Zm00001e033341_P001	Zm00001e033341	ROP-activating protein (RopGAP)	0.05	OrthoFinder output from all 47 species
Zm00001e039383_P002	Zm00001e039383	ROP-activating protein (RopGAP)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005618	cell wall	None	Extended
CC	GO:0005737	cytoplasm	ISM	Interproscan
CC	GO:0005886	plasma membrane	IDA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009416	response to light stimulus	None	Extended
CC	GO:0009505	plant-type cell wall	None	Extended
CC	GO:0009531	secondary cell wall	IDA	Interproscan
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009639	response to red or far red light	None	Extended
BP	GO:0009664	plant-type cell wall organization	IMP	Interproscan
BP	GO:0009914	hormone transport	None	Extended
BP	GO:0009926	auxin polar transport	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010053	root epidermal cell differentiation	None	Extended
BP	GO:0010218	response to far red light	RCA	Interproscan
BP	GO:0010817	regulation of hormone levels	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0021700	developmental maturation	None	Extended
BP	GO:0030154	cell differentiation	None	Extended
CC	GO:0030312	external encapsulating structure	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0045229	external encapsulating structure organization	None	Extended
BP	GO:0048469	cell maturation	None	Extended
BP	GO:0048764	trichoblast maturation	None	Extended
BP	GO:0048765	root hair cell differentiation	RCA	Interproscan
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0060918	auxin transport	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071669	plant-type cell wall organization or biogenesis	None	Extended
BP	GO:0071695	anatomical structure maturation	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0090627	plant epidermal cell differentiation	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	IEP	HCCA
BP	GO:0000902	cell morphogenesis	IEP	HCCA
BP	GO:0000904	cell morphogenesis involved in differentiation	IEP	HCCA
MF	GO:0003674	molecular_function	IEP	HCCA
MF	GO:0003774	cytoskeletal motor activity	IEP	HCCA
MF	GO:0003777	microtubule motor activity	IEP	HCCA
MF	GO:0004693	cyclin-dependent protein serine/threonine kinase activity	IEP	HCCA
MF	GO:0005200	structural constituent of cytoskeleton	IEP	HCCA
BP	GO:0005975	carbohydrate metabolic process	IEP	HCCA
BP	GO:0007017	microtubule-based process	IEP	HCCA
BP	GO:0008156	negative regulation of DNA replication	IEP	HCCA
BP	GO:0008356	asymmetric cell division	IEP	HCCA
BP	GO:0008361	regulation of cell size	IEP	HCCA
BP	GO:0009059	macromolecule biosynthetic process	IEP	HCCA
BP	GO:0009410	response to xenobiotic stimulus	IEP	HCCA
BP	GO:0009411	response to UV	IEP	HCCA
BP	GO:0009606	tropism	IEP	HCCA
BP	GO:0009638	phototropism	IEP	HCCA
BP	GO:0009653	anatomical structure morphogenesis	IEP	HCCA
MF	GO:0009672	auxin:proton symporter activity	IEP	HCCA
BP	GO:0009785	blue light signaling pathway	IEP	HCCA
BP	GO:0009825	multidimensional cell growth	IEP	HCCA
BP	GO:0009826	unidimensional cell growth	IEP	HCCA
BP	GO:0009932	cell tip growth	IEP	HCCA
BP	GO:0009958	positive gravitropism	IEP	HCCA
CC	GO:0009986	cell surface	IEP	HCCA
BP	GO:0010015	root morphogenesis	IEP	HCCA
BP	GO:0010075	regulation of meristem growth	IEP	HCCA
BP	GO:0010082	regulation of root meristem growth	IEP	HCCA
BP	GO:0010155	regulation of proton transport	IEP	HCCA
BP	GO:0010215	cellulose microfibril organization	IEP	HCCA
BP	GO:0010315	auxin export across the plasma membrane	IEP	HCCA
BP	GO:0010440	stomatal lineage progression	IEP	HCCA
BP	GO:0010928	regulation of auxin mediated signaling pathway	IEP	HCCA
BP	GO:0010948	negative regulation of cell cycle process	IEP	HCCA
CC	GO:0012506	vesicle membrane	IEP	HCCA
BP	GO:0016051	carbohydrate biosynthetic process	IEP	HCCA
CC	GO:0016328	lateral plasma membrane	IEP	HCCA
BP	GO:0030198	extracellular matrix organization	IEP	HCCA
BP	GO:0030308	negative regulation of cell growth	IEP	HCCA
BP	GO:0030522	intracellular receptor signaling pathway	IEP	HCCA
CC	GO:0031090	organelle membrane	IEP	HCCA
BP	GO:0032535	regulation of cellular component size	IEP	HCCA
BP	GO:0032875	regulation of DNA endoreduplication	IEP	HCCA
BP	GO:0032876	negative regulation of DNA endoreduplication	IEP	HCCA
BP	GO:0040008	regulation of growth	IEP	HCCA
BP	GO:0043062	extracellular structure organization	IEP	HCCA
BP	GO:0043473	pigmentation	IEP	HCCA
BP	GO:0043476	pigment accumulation	IEP	HCCA
BP	GO:0043478	pigment accumulation in response to UV light	IEP	HCCA
BP	GO:0043479	pigment accumulation in tissues in response to UV light	IEP	HCCA
BP	GO:0043480	pigment accumulation in tissues	IEP	HCCA
BP	GO:0043481	anthocyanin accumulation in tissues in response to UV light	IEP	HCCA
CC	GO:0045298	tubulin complex	IEP	HCCA
BP	GO:0045786	negative regulation of cell cycle	IEP	HCCA
BP	GO:0045926	negative regulation of growth	IEP	HCCA
BP	GO:0048588	developmental cell growth	IEP	HCCA
BP	GO:0048589	developmental growth	IEP	HCCA
BP	GO:0048638	regulation of developmental growth	IEP	HCCA
BP	GO:0048766	root hair initiation	IEP	HCCA
BP	GO:0048767	root hair elongation	IEP	HCCA
BP	GO:0050789	regulation of biological process	IEP	HCCA
BP	GO:0050793	regulation of developmental process	IEP	HCCA
BP	GO:0051053	negative regulation of DNA metabolic process	IEP	HCCA
BP	GO:0051726	regulation of cell cycle	IEP	HCCA
BP	GO:0060560	developmental growth involved in morphogenesis	IEP	HCCA
BP	GO:0071478	cellular response to radiation	IEP	HCCA
BP	GO:0071482	cellular response to light stimulus	IEP	HCCA
BP	GO:0071483	cellular response to blue light	IEP	HCCA
MF	GO:0080161	auxin transmembrane transporter activity	IEP	HCCA
BP	GO:0090066	regulation of anatomical structure size	IEP	HCCA
BP	GO:0090329	regulation of DNA-templated DNA replication	IEP	HCCA
MF	GO:0097472	cyclin-dependent protein kinase activity	IEP	HCCA
BP	GO:0140115	export across plasma membrane	IEP	HCCA
BP	GO:0140352	export from cell	IEP	HCCA
MF	GO:0140657	ATP-dependent activity	IEP	HCCA
BP	GO:1901576	organic substance biosynthetic process	IEP	HCCA
BP	GO:1904062	regulation of monoatomic cation transmembrane transport	IEP	HCCA
BP	GO:2000038	regulation of stomatal complex development	IEP	HCCA
BP	GO:2000104	negative regulation of DNA-templated DNA replication	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000198	RhoGAP_dom	167	301
IPR000095	CRIB_dom	104	133

External Links

No external refs found!

AT2G46710

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation