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  5. AT3G02990

AT3G02990 (HSFA1E, ATHSFA1E)


Aliases : HSFA1E, ATHSFA1E

Description : heat shock transcription factor A1E


Gene families : OG0000093 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000093_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G02990
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00176p00025440 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HSF (heat... 0.02 OrthoFinder output from all 47 species
AT1G67970 HSFA8, AT-HSFA8 heat shock transcription factor A8 0.01 OrthoFinder output from all 47 species
Adi_g075153 HSFA1B, ATHSF3,... transcriptional regulator *(HsfA1) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g05891 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene08813.t1 HSFB4, SCZ,... HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g08179 ATHSF1, HSF1,... transcriptional regulator *(HsfA1) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.35G052000.1 HSFB4, SCZ,... HSF-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dde_g26939 HSFA1E, ATHSFA1E HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g10318 ATHSF1, HSF1,... transcriptional regulator *(HsfA1) & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os05g45410.1 HSF A4A,... transcription factor (HSF) 0.03 OrthoFinder output from all 47 species
LOC_Os09g28200.1 HSFB4, SCZ,... transcription factor (HSF) 0.03 OrthoFinder output from all 47 species
Lfl_g03202 HSFA1B, ATHSF3,... transcriptional regulator *(HsfA1) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g27595 HSFA1B, ATHSF3,... HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g06498 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02775 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g64053 AT-HSFA6B, HSFA6B HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0052.g014027 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: CDS=77-1222 0.03 OrthoFinder output from all 47 species
Sam_g17174 No alias transcriptional regulator *(HsfA1) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g053960.3.1 AT-HSFA6B,... transcription factor (HSF) 0.03 OrthoFinder output from all 47 species
Zm00001e009944_P001 HSF4, HSFB1,... transcription factor (HSF) 0.03 OrthoFinder output from all 47 species
Zm00001e011633_P001 HSFA1B, ATHSF3,... transcription factor (HSF). transcriptional regulator (HsfA1) 0.03 OrthoFinder output from all 47 species
Zm00001e029052_P001 HSFA4C, RHA1,... transcription factor (HSF) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0009408 response to heat RCA Interproscan
BP GO:0010162 seed dormancy process RCA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IEP HCCA
CC GO:0005654 nucleoplasm IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
BP GO:0006914 autophagy IEP HCCA
BP GO:0008284 positive regulation of cell population proliferation IEP HCCA
CC GO:0009295 nucleoid IEP HCCA
BP GO:0009648 photoperiodism IEP HCCA
BP GO:0009791 post-embryonic development IEP HCCA
BP GO:0009825 multidimensional cell growth IEP HCCA
BP GO:0009893 positive regulation of metabolic process IEP HCCA
BP GO:0009894 regulation of catabolic process IEP HCCA
BP GO:0009896 positive regulation of catabolic process IEP HCCA
BP GO:0009908 flower development IEP HCCA
BP GO:0009911 positive regulation of flower development IEP HCCA
BP GO:0010150 leaf senescence IEP HCCA
BP GO:0010604 positive regulation of macromolecule metabolic process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
BP GO:0042176 regulation of protein catabolic process IEP HCCA
CC GO:0042644 chloroplast nucleoid IEP HCCA
CC GO:0042646 plastid nucleoid IEP HCCA
BP GO:0043687 post-translational protein modification IEP HCCA
BP GO:0045732 positive regulation of protein catabolic process IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0048573 photoperiodism, flowering IEP HCCA
BP GO:0048582 positive regulation of post-embryonic development IEP HCCA
BP GO:0051094 positive regulation of developmental process IEP HCCA
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051240 positive regulation of multicellular organismal process IEP HCCA
BP GO:0051247 positive regulation of protein metabolic process IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
BP GO:0090567 reproductive shoot system development IEP HCCA
BP GO:0090693 plant organ senescence IEP HCCA
BP GO:2000243 positive regulation of reproductive process IEP HCCA
InterPro domains Description Start Stop
IPR000232 HSF_DNA-bd 24 113
No external refs found!