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AT3G03400


Description : EF hand calcium-binding protein family


Gene families : OG0000383 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000383_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G03400

Target Alias Description ECC score Gene Family Method Actions
AT2G36180 No alias EF hand calcium-binding protein family 0.06 OrthoFinder output from all 47 species
AT5G17180 No alias unknown protein; Has 1807 Blast hits to 1807 proteins in... 0.03 OrthoFinder output from all 47 species
AT5G17470 No alias EF hand calcium-binding protein family 0.03 OrthoFinder output from all 47 species
Als_g33679 TCH2, CML24 calcium sensor *(CML) & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene14419.t1 TCH2, CML24,... calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01031752001 No alias Calmodulin-like protein 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_35180 No alias Probable calcium-binding protein CML25 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os08g44660.1 APC1, PC1, LOC_Os08g44660 Polcalcin Phl p 7 OS=Phleum pratense... 0.03 OrthoFinder output from all 47 species
LOC_Os11g04560.1 LOC_Os11g04560 Probable calcium-binding protein CML36 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_10124165g0020 No alias Probable calcium-binding protein CML10 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Pnu_g27721 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g118810.1.1 Solyc03g118810 Calcium-binding allergen Ole e 8 OS=Olea europaea... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding ISS Interproscan
CC GO:0005575 cellular_component ND Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 79 134
IPR002048 EF_hand_dom 42 59
IPR002048 EF_hand_dom 6 32
No external refs found!