AT3G03740 (BPM4, ATBPM4)

Aliases : BPM4, ATBPM4

Description : BTB-POZ and MATH domain 4

Gene families : OG0000564 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000564_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G03740

Target	Alias	Description	ECC score	Gene Family Method
Aev_g12476	ATBPM2, BPM2	substrate adaptor *(BPM) of CUL3-BTB E3 ubiquitin ligase...	0.02	OrthoFinder output from all 47 species
Aev_g23910	ATBPM2, BPM2	substrate adaptor *(BPM) of CUL3-BTB E3 ubiquitin ligase...	0.02	OrthoFinder output from all 47 species
Aob_g01429	ATBPM2, BPM2	substrate adaptor *(BPM) of CUL3-BTB E3 ubiquitin ligase...	0.02	OrthoFinder output from all 47 species
Aspi01Gene48496.t1	BPM4, ATBPM4,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene70171.t1	ATBPM2, BPM2,...	substrate adaptor *(BPM) of CUL3-BTB E3 ubiquitin ligase...	0.02	OrthoFinder output from all 47 species
Cba_g58524	ATBPM2, BPM2	substrate adaptor *(BPM) of CUL3-BTB E3 ubiquitin ligase...	0.02	OrthoFinder output from all 47 species
Ceric.01G058700.1	BPM4, ATBPM4,...	substrate adaptor *(BPM) of CUL3-BTB E3 ubiquitin ligase...	0.03	OrthoFinder output from all 47 species
Gb_01983	BPM4, ATBPM4	BTB/POZ and MATH domain-containing protein 4...	0.03	OrthoFinder output from all 47 species
LOC_Os10g29100.1	ATBPM2, BPM2,...	BTB/POZ and MATH domain-containing protein 1...	0.03	OrthoFinder output from all 47 species
LOC_Os10g29110.1	ATBPM2, BPM2,...	BTB/POZ and MATH domain-containing protein 1...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0001101	response to acid chemical	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0005829	cytosol	IDA	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006970	response to osmotic stress	IEP	Interproscan
BP	GO:0007154	cell communication	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009414	response to water deprivation	None	Extended
BP	GO:0009415	response to water	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009651	response to salt stress	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0009991	response to extracellular stimulus	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0031668	cellular response to extracellular stimulus	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042631	cellular response to water deprivation	IEP	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0062197	cellular response to chemical stress	None	Extended
BP	GO:0070887	cellular response to chemical stimulus	None	Extended
BP	GO:0071214	cellular response to abiotic stimulus	None	Extended
BP	GO:0071229	cellular response to acid chemical	None	Extended
BP	GO:0071462	cellular response to water stimulus	None	Extended
BP	GO:0071470	cellular response to osmotic stress	None	Extended
BP	GO:0071472	cellular response to salt stress	IEP	Interproscan
BP	GO:0071496	cellular response to external stimulus	None	Extended
BP	GO:0104004	cellular response to environmental stimulus	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1901701	cellular response to oxygen-containing compound	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004518	nuclease activity	IEP	HCCA
MF	GO:0004527	exonuclease activity	IEP	HCCA
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	HCCA
CC	GO:0005622	intracellular anatomical structure	IEP	HCCA
BP	GO:0009648	photoperiodism	IEP	HCCA
BP	GO:0009937	regulation of gibberellic acid mediated signaling pathway	IEP	HCCA
BP	GO:0009966	regulation of signal transduction	IEP	HCCA
BP	GO:0010029	regulation of seed germination	IEP	HCCA
BP	GO:0010431	seed maturation	IEP	HCCA
BP	GO:0010646	regulation of cell communication	IEP	HCCA
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	HCCA
BP	GO:0021700	developmental maturation	IEP	HCCA
BP	GO:0023051	regulation of signaling	IEP	HCCA
MF	GO:0030674	protein-macromolecule adaptor activity	IEP	HCCA
BP	GO:0048573	photoperiodism, flowering	IEP	HCCA
BP	GO:0048609	multicellular organismal reproductive process	IEP	HCCA
MF	GO:0060090	molecular adaptor activity	IEP	HCCA
BP	GO:0071695	anatomical structure maturation	IEP	HCCA
BP	GO:1900140	regulation of seedling development	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000210	BTB/POZ_dom	208	326

External Links

No external refs found!

AT3G03740 (BPM4, ATBPM4)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation