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AT3G04180


Description : RmlC-like cupins superfamily protein


Gene families : OG0000033 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G04180
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00231430 ATGER3, GLP3B,... Germin-like protein subfamily 3 member 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00045p00155350 evm_27.TU.AmTr_v1... Germin-like protein 5-1 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder output from all 47 species
AMTR_s00089p00119480 evm_27.TU.AmTr_v1... Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder output from all 47 species
AMTR_s00089p00120230 evm_27.TU.AmTr_v1... Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder output from all 47 species
AT3G05930 GLP8 germin-like protein 8 0.03 OrthoFinder output from all 47 species
AT5G39130 No alias RmlC-like cupins superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g057826 GLP5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g37435 GLP10 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene30646.t1 GLP5, Aspi01Gene30646 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene30648.t1 GLP5, Aspi01Gene30648 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene30826.t1 GLP7, Aspi01Gene30826 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene43893.t1 Aspi01Gene43893 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene67636.t1 Aspi01Gene67636 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0228.g059064 No alias not classified & original description: CDS=1-714 0.02 OrthoFinder output from all 47 species
Ceric.1Z075000.1 GLP10, Ceric.1Z075000 not classified & original description: pacid=50634957... 0.03 OrthoFinder output from all 47 species
Ceric.20G043100.1 GL22, Ceric.20G043100 not classified & original description: pacid=50566937... 0.02 OrthoFinder output from all 47 species
Dac_g01300 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g13354 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g31663 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01000098001 No alias Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01000101001 No alias Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01016761001 ATGER3, GLP3B,... Auxin-binding protein ABP19a OS=Prunus persica 0.04 OrthoFinder output from all 47 species
GSVIVT01031079001 No alias Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Gb_10685 GLP5 Putative germin-like protein 3-2 OS=Oryza sativa subsp.... 0.04 OrthoFinder output from all 47 species
Gb_30305 GLP5 Germin-like protein subfamily 2 member 1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os09g39510.1 GLP5, LOC_Os09g39510 Germin-like protein 9-1 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Len_g12131 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10427432g0020 No alias Putative germin-like protein 2-2 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
MA_494629g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp2g15610.1 GLP10 Germin-like protein 9-3 OS=Oryza sativa subsp. japonica... 0.05 OrthoFinder output from all 47 species
Mp5g00860.1 GLP5 Germin-like protein 9-3 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
Mp5g13860.1 GLP4 Germin-like protein 5-1 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Mp5g13870.1 GLP4 Germin-like protein 5-1 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
Mp5g16550.1 GLP4 Germin-like protein 3-6 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Msp_g06875 GLP5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g18979 GLP4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g33855 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43303 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c17_21300V3.1 Pp3c17_21300 RmlC-like cupins superfamily protein 0.02 OrthoFinder output from all 47 species
Pp3c23_1399V3.1 GLP5, Pp3c23_1399 germin-like protein 5 0.02 OrthoFinder output from all 47 species
Pp3c3_16510V3.1 GLP10, Pp3c3_16510 germin-like protein subfamily 2 member 2 precursor 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0038.g011968 GLP10 not classified & original description: CDS=1-687 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0043.g012821 GLP5 not classified & original description: CDS=1-681 0.03 OrthoFinder output from all 47 species
Smo89841 No alias Germin-like protein subfamily T member 2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc01g088275.1.1 Solyc01g088275 Germin-like protein 8-2 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Solyc01g102380.5.1.1 GLP5, Solyc01g102380 Nectarin-1 OS=Nicotiana langsdorffii x Nicotiana... 0.02 OrthoFinder output from all 47 species
Solyc09g090005.1.1 Solyc09g090005 Germin-like protein subfamily 1 member 7 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Spa_g39566 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e032937_P001 GLP10, Zm00001e032937 Germin-like protein 5-1 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0006869 lipid transport IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009685 gibberellin metabolic process IEP HCCA
BP GO:0009686 gibberellin biosynthetic process IEP HCCA
BP GO:0009740 gibberellic acid mediated signaling pathway IEP HCCA
BP GO:0010476 gibberellin mediated signaling pathway IEP HCCA
BP GO:0016101 diterpenoid metabolic process IEP HCCA
BP GO:0016102 diterpenoid biosynthetic process IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
InterPro domains Description Start Stop
IPR006045 Cupin_1 65 215
No external refs found!