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  5. AT3G04940

AT3G04940 (ATCYSD1, CYSD1)


Aliases : ATCYSD1, CYSD1

Description : cysteine synthase D1


Gene families : OG0000535 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000535_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G04940
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
AT3G22460 OASA2 O-acetylserine (thiol) lyase (OAS-TL) isoform A2 0.04 OrthoFinder output from all 47 species
Aob_g07073 ACS1, OASB,... EC_2.5 transferase transferring alkyl or aryl group,... 0.02 OrthoFinder output from all 47 species
Dac_g11650 CYSC1,... EC_2.5 transferase transferring alkyl or aryl group,... 0.02 OrthoFinder output from all 47 species
Dde_g12413 ACS1, OASB,... EC_2.5 transferase transferring alkyl or aryl group,... 0.02 OrthoFinder output from all 47 species
Ehy_g16676 CYSD2, ATCYSD2 EC_2.5 transferase transferring alkyl or aryl group,... 0.02 OrthoFinder output from all 47 species
LOC_Os03g53650.1 CYTACS1, OLD3,... O-acetylserine sulfydrylase 0.02 OrthoFinder output from all 47 species
Len_g29732 ACS1, OASB,... EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
Len_g37998 ACS1, OASB,... EC_2.5 transferase transferring alkyl or aryl group,... 0.02 OrthoFinder output from all 47 species
Lfl_g05975 ATCS-C, OASC EC_2.5 transferase transferring alkyl or aryl group,... 0.02 OrthoFinder output from all 47 species
Mp4g01360.1 CYTACS1, OLD3,... Enzyme classification.EC_2 transferases.EC_2.5... 0.02 OrthoFinder output from all 47 species
Msp_g47985 CYSC1,... EC_2.5 transferase transferring alkyl or aryl group,... 0.02 OrthoFinder output from all 47 species
Pir_g08230 ATCS-C, OASC EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
Pnu_g13700 DES1 EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
Sam_g12073 No alias EC_2.5 transferase transferring alkyl or aryl group,... 0.02 OrthoFinder output from all 47 species
Tin_g03879 CYSC1,... EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
Tin_g14823 CYTACS1, OLD3,... EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process RCA Interproscan
MF GO:0004124 cysteine synthase activity IDA Interproscan
MF GO:0004124 cysteine synthase activity IMP Interproscan
MF GO:0004124 cysteine synthase activity ISS Interproscan
BP GO:0008652 amino acid biosynthetic process RCA Interproscan
BP GO:0009069 serine family amino acid metabolic process RCA Interproscan
BP GO:0019344 cysteine biosynthetic process IDA Interproscan
BP GO:0019344 cysteine biosynthetic process ISS Interproscan
BP GO:0019344 cysteine biosynthetic process RCA Interproscan
BP GO:0042545 cell wall modification RCA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000255 allantoin metabolic process IEP HCCA
BP GO:0000256 allantoin catabolic process IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0003858 3-hydroxybutyrate dehydrogenase activity IEP HCCA
MF GO:0004392 heme oxygenase (decyclizing) activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004564 beta-fructofuranosidase activity IEP HCCA
MF GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity IEP HCCA
CC GO:0005829 cytosol IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005985 sucrose metabolic process IEP HCCA
BP GO:0005987 sucrose catabolic process IEP HCCA
BP GO:0006081 cellular aldehyde metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006144 purine nucleobase metabolic process IEP HCCA
BP GO:0006145 purine nucleobase catabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006788 heme oxidation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007020 microtubule nucleation IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
MF GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity IEP HCCA
BP GO:0009086 methionine biosynthetic process IEP HCCA
BP GO:0009112 nucleobase metabolic process IEP HCCA
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009313 oligosaccharide catabolic process IEP HCCA
BP GO:0009657 plastid organization IEP HCCA
BP GO:0009658 chloroplast organization IEP HCCA
BP GO:0010024 phytochromobilin biosynthetic process IEP HCCA
BP GO:0010050 vegetative phase change IEP HCCA
BP GO:0010135 ureide metabolic process IEP HCCA
BP GO:0010136 ureide catabolic process IEP HCCA
BP GO:0010769 regulation of cell morphogenesis involved in differentiation IEP HCCA
MF GO:0015099 nickel cation transmembrane transporter activity IEP HCCA
BP GO:0015675 nickel cation transport IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016712 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016813 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines IEP HCCA
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
BP GO:0042168 heme metabolic process IEP HCCA
BP GO:0042726 flavin-containing compound metabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043605 amide catabolic process IEP HCCA
BP GO:0043648 dicarboxylic acid metabolic process IEP HCCA
BP GO:0043650 dicarboxylic acid biosynthetic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044275 cellular carbohydrate catabolic process IEP HCCA
BP GO:0046113 nucleobase catabolic process IEP HCCA
BP GO:0046352 disaccharide catabolic process IEP HCCA
BP GO:0046443 FAD metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046490 isopentenyl diphosphate metabolic process IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
BP GO:0048638 regulation of developmental growth IEP HCCA
BP GO:0051202 phytochromobilin metabolic process IEP HCCA
BP GO:0051510 regulation of unidimensional cell growth IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
MF GO:0071522 ureidoglycine aminohydrolase activity IEP HCCA
BP GO:0072387 flavin adenine dinucleotide metabolic process IEP HCCA
BP GO:0072523 purine-containing compound catabolic process IEP HCCA
BP GO:0080092 regulation of pollen tube growth IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001926 TrpB-like_PALP 13 299
No external refs found!