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  5. AT3G05327

AT3G05327


Description : Cyclin family protein


Gene families : OG0000303 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000303_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G05327
Cluster HCCA: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
AT2G45080 cycp3;1 cyclin p3;1 0.03 OrthoFinder output from all 47 species
Adi_g011611 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Aev_g16557 cycp3;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Ala_g15122 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Ala_g16985 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Als_g21897 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Als_g37867 CYCP2;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Aob_g07900 CYCP2;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Ceric.07G089000.1 CYCP3;2, Ceric.07G089000 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Ceric.31G015200.1 CYCP3;2, Ceric.31G015200 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Dde_g07807 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Ehy_g05568 cycp3;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Gb_27223 CYCP3;2 cyclin (CYCP) 0.05 OrthoFinder output from all 47 species
Gb_27229 CYCP3;2 cyclin (CYCP) 0.02 OrthoFinder output from all 47 species
LOC_Os02g03294.1 CYCP4;1, LOC_Os02g03294 cyclin (CYCP) 0.04 OrthoFinder output from all 47 species
LOC_Os04g46000.1 CYCP4;1, LOC_Os04g46000 cyclin (CYCP) 0.03 OrthoFinder output from all 47 species
Len_g08941 cycp3;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Lfl_g03842 CYCP2;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
MA_8772g0010 cycp3;1 cyclin (CYCP) 0.03 OrthoFinder output from all 47 species
MA_92793g0010 cycp3;1 cyclin (CYCP) 0.03 OrthoFinder output from all 47 species
Msp_g27330 CYCP2;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Msp_g48178 cycp3;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Nbi_g01825 CYCP2;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Ore_g16965 CYCP2;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Ore_g22726 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Ore_g28947 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Ppi_g00643 CYCP2;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Ppi_g07325 CYCP3;2 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Ppi_g13236 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0217.g026066 cycp3;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Sam_g12163 No alias regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Sam_g16477 No alias regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Spa_g12296 CYCP3;2 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Spa_g16879 CYCP3;2 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Tin_g12466 CYCP2;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Tin_g19076 CYCP2;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Tin_g28471 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Zm00001e007314_P001 cycp3;1, Zm00001e007314 cyclin (CYCP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0010440 stomatal lineage progression RCA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006857 oligopeptide transport IEP HCCA
BP GO:0006865 amino acid transport IEP HCCA
BP GO:0008283 cell population proliferation IEP HCCA
BP GO:0009887 animal organ morphogenesis IEP HCCA
BP GO:0009962 regulation of flavonoid biosynthetic process IEP HCCA
BP GO:0009963 positive regulation of flavonoid biosynthetic process IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015112 nitrate transmembrane transporter activity IEP HCCA
MF GO:0015144 carbohydrate transmembrane transporter activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0015706 nitrate transmembrane transport IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015804 neutral amino acid transport IEP HCCA
BP GO:0015824 proline transport IEP HCCA
BP GO:0015833 peptide transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0019757 glycosinolate metabolic process IEP HCCA
BP GO:0019758 glycosinolate biosynthetic process IEP HCCA
BP GO:0019760 glucosinolate metabolic process IEP HCCA
BP GO:0019761 glucosinolate biosynthetic process IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
CC GO:0031012 extracellular matrix IEP HCCA
BP GO:0042886 amide transport IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
MF GO:0051119 sugar transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0080054 low-affinity nitrate transmembrane transporter activity IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098661 inorganic anion transmembrane transport IEP HCCA
BP GO:1902025 nitrate import IEP HCCA
InterPro domains Description Start Stop
IPR013922 Cyclin_PHO80-like 39 172
No external refs found!