AT3G05420 (ACBP4)

Aliases : ACBP4

Description : acyl-CoA binding protein 4

Gene families : OG0001589 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001589_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G05420

Target	Alias	Description	ECC score	Gene Family Method
Adi_g012010	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g080804	ACBP4	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g107315	ACBP4	acyl-CoA-binding protein *(ACBP4/5) & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g07928	ACBP4	acyl-CoA-binding protein *(ACBP4/5) & original description: none	0.08	OrthoFinder output from all 47 species
Ala_g07521	ACBP4	acyl-CoA-binding protein *(ACBP4/5) & original description: none	0.04	OrthoFinder output from all 47 species
Als_g06500	ACBP4	not classified & original description: none	0.07	OrthoFinder output from all 47 species
Als_g33638	ACBP4	acyl-CoA-binding protein *(ACBP4/5) & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g13893	ACBP4	acyl-CoA-binding protein *(ACBP4/5) & original description: none	0.06	OrthoFinder output from all 47 species
Azfi_s0045.g029979	ACBP4	acyl-CoA-binding protein *(ACBP4/5) & original...	0.06	OrthoFinder output from all 47 species
Azfi_s0090.g042698	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.07	OrthoFinder output from all 47 species
Cba_g77449	ACBP4	acyl-CoA-binding protein *(ACBP4/5) & original description: none	0.03	OrthoFinder output from all 47 species
Cre02.g074650	ACBP4	Acyl-CoA-binding domain-containing protein 4...	0.08	OrthoFinder output from all 47 species
Dcu_g08239	ACBP4	acyl-CoA-binding protein *(ACBP4/5) & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g13338	ACBP4	acyl-CoA-binding protein *(ACBP4/5) & original description: none	0.07	OrthoFinder output from all 47 species
Dde_g04888	ACBP4	acyl-CoA-binding protein *(ACBP4/5) & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01016168001	No alias	Acyl-CoA-binding domain-containing protein 4...	0.03	OrthoFinder output from all 47 species
GSVIVT01031116001	ACBP4	Acyl-CoA-binding domain-containing protein 4...	0.1	OrthoFinder output from all 47 species
LOC_Os02g57690.2	LOC_Os02g57690	Acyl-CoA-binding domain-containing protein 6 OS=Oryza...	0.03	OrthoFinder output from all 47 species
LOC_Os03g61930.1	ACBP4, LOC_Os03g61930	Acyl-CoA-binding domain-containing protein 6 OS=Oryza...	0.11	OrthoFinder output from all 47 species
LOC_Os12g35560.1	ACBP4, LOC_Os12g35560	Acyl-CoA-binding domain-containing protein 6 OS=Oryza...	0.09	OrthoFinder output from all 47 species
Lfl_g04809	ACBP4	acyl-CoA-binding protein *(ACBP4/5) & original description: none	0.07	OrthoFinder output from all 47 species
MA_10436752g0010	ACBP4	Acyl-CoA-binding domain-containing protein 6 OS=Oryza...	0.03	OrthoFinder output from all 47 species
Mp3g16170.1	ACBP4	Acyl-CoA-binding domain-containing protein 4...	0.05	OrthoFinder output from all 47 species
Nbi_g11499	ACBP4	acyl-CoA-binding protein *(ACBP4/5) & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g09453	ACBP4	acyl-CoA-binding protein *(ACBP4/5) & original description: none	0.06	OrthoFinder output from all 47 species
Pp3c14_17403V3.1	ACBP4, Pp3c14_17403	acyl-CoA binding protein 4	0.02	OrthoFinder output from all 47 species
Sam_g10083	No alias	acyl-CoA-binding protein *(ACBP4/5) & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g13845	No alias	acyl-CoA-binding protein *(ACBP4/5) & original description: none	0.04	OrthoFinder output from all 47 species
Solyc01g099350.3.1	ACBP4, Solyc01g099350	Acyl-CoA-binding domain-containing protein 4...	0.23	OrthoFinder output from all 47 species
Spa_g13119	ACBP4	acyl-CoA-binding protein *(ACBP4/5) & original description: none	0.09	OrthoFinder output from all 47 species
Zm00001e006279_P004	ACBP4, Zm00001e006279	Acyl-CoA-binding domain-containing protein 6 OS=Oryza...	0.12	OrthoFinder output from all 47 species
Zm00001e011691_P002	ACBP4, Zm00001e011691	Acyl-CoA-binding domain-containing protein 6 OS=Oryza...	0.11	OrthoFinder output from all 47 species
Zm00001e018275_P004	ACBP4, Zm00001e018275	Acyl-CoA-binding domain-containing protein 6 OS=Oryza...	0.06	OrthoFinder output from all 47 species
Zm00001e023562_P001	Zm00001e023562	Acyl-CoA-binding domain-containing protein 4...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000062	fatty-acyl-CoA binding	IDA	Interproscan
MF	GO:0000062	fatty-acyl-CoA binding	ISS	Interproscan
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005737	cytoplasm	IDA	Interproscan
CC	GO:0005737	cytoplasm	ISM	Interproscan
CC	GO:0005829	cytosol	IDA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006869	lipid transport	IDA	Interproscan
BP	GO:0006869	lipid transport	RCA	Interproscan
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008289	lipid binding	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009416	response to light stimulus	TAS	Interproscan
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009723	response to ethylene	IEP	Interproscan
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009753	response to jasmonic acid	IEP	Interproscan
BP	GO:0010033	response to organic substance	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0033218	amide binding	None	Extended
BP	GO:0033993	response to lipid	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0042221	response to chemical	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0070542	response to fatty acid	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0120227	acyl-CoA binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
MF	GO:1901567	fatty acid derivative binding	None	Extended
MF	GO:1901681	sulfur compound binding	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000266	mitochondrial fission	IEP	HCCA
BP	GO:0000271	polysaccharide biosynthetic process	IEP	HCCA
MF	GO:0003924	GTPase activity	IEP	HCCA
MF	GO:0004222	metalloendopeptidase activity	IEP	HCCA
MF	GO:0004333	fumarate hydratase activity	IEP	HCCA
MF	GO:0004576	oligosaccharyl transferase activity	IEP	HCCA
MF	GO:0005388	P-type calcium transporter activity	IEP	HCCA
MF	GO:0005525	GTP binding	IEP	HCCA
CC	GO:0005618	cell wall	IEP	HCCA
CC	GO:0005635	nuclear envelope	IEP	HCCA
CC	GO:0005741	mitochondrial outer membrane	IEP	HCCA
CC	GO:0005750	mitochondrial respiratory chain complex III	IEP	HCCA
CC	GO:0005758	mitochondrial intermembrane space	IEP	HCCA
CC	GO:0005759	mitochondrial matrix	IEP	HCCA
CC	GO:0005768	endosome	IEP	HCCA
CC	GO:0005773	vacuole	IEP	HCCA
CC	GO:0005774	vacuolar membrane	IEP	HCCA
CC	GO:0005783	endoplasmic reticulum	IEP	HCCA
CC	GO:0005794	Golgi apparatus	IEP	HCCA
CC	GO:0005795	Golgi stack	IEP	HCCA
CC	GO:0005797	Golgi medial cisterna	IEP	HCCA
CC	GO:0005801	cis-Golgi network	IEP	HCCA
CC	GO:0005802	trans-Golgi network	IEP	HCCA
CC	GO:0005874	microtubule	IEP	HCCA
CC	GO:0005886	plasma membrane	IEP	HCCA
CC	GO:0005911	cell-cell junction	IEP	HCCA
CC	GO:0005938	cell cortex	IEP	HCCA
BP	GO:0005975	carbohydrate metabolic process	IEP	HCCA
BP	GO:0005976	polysaccharide metabolic process	IEP	HCCA
BP	GO:0005996	monosaccharide metabolic process	IEP	HCCA
BP	GO:0006006	glucose metabolic process	IEP	HCCA
BP	GO:0006073	cellular glucan metabolic process	IEP	HCCA
BP	GO:0006094	gluconeogenesis	IEP	HCCA
BP	GO:0006486	protein glycosylation	IEP	HCCA
BP	GO:0006497	protein lipidation	IEP	HCCA
BP	GO:0006498	N-terminal protein lipidation	IEP	HCCA
BP	GO:0006499	N-terminal protein myristoylation	IEP	HCCA
BP	GO:0006508	proteolysis	IEP	HCCA
BP	GO:0006890	retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum	IEP	HCCA
BP	GO:0006897	endocytosis	IEP	HCCA
BP	GO:0006970	response to osmotic stress	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
BP	GO:0007005	mitochondrion organization	IEP	HCCA
MF	GO:0008047	enzyme activator activity	IEP	HCCA
BP	GO:0008152	metabolic process	IEP	HCCA
BP	GO:0009057	macromolecule catabolic process	IEP	HCCA
BP	GO:0009250	glucan biosynthetic process	IEP	HCCA
BP	GO:0009306	protein secretion	IEP	HCCA
CC	GO:0009504	cell plate	IEP	HCCA
CC	GO:0009505	plant-type cell wall	IEP	HCCA
CC	GO:0009506	plasmodesma	IEP	HCCA
BP	GO:0009651	response to salt stress	IEP	HCCA
BP	GO:0010035	response to inorganic substance	IEP	HCCA
BP	GO:0010038	response to metal ion	IEP	HCCA
BP	GO:0010152	pollen maturation	IEP	HCCA
BP	GO:0010498	proteasomal protein catabolic process	IEP	HCCA
MF	GO:0015085	calcium ion transmembrane transporter activity	IEP	HCCA
MF	GO:0015662	P-type ion transporter activity	IEP	HCCA
MF	GO:0015926	glucosidase activity	IEP	HCCA
MF	GO:0016004	phospholipase activator activity	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
BP	GO:0016043	cellular component organization	IEP	HCCA
BP	GO:0016051	carbohydrate biosynthetic process	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
BP	GO:0018377	protein myristoylation	IEP	HCCA
MF	GO:0019001	guanyl nucleotide binding	IEP	HCCA
BP	GO:0019318	hexose metabolic process	IEP	HCCA
BP	GO:0019319	hexose biosynthetic process	IEP	HCCA
BP	GO:0019321	pentose metabolic process	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
MF	GO:0019829	ATPase-coupled monoatomic cation transmembrane transporter activity	IEP	HCCA
BP	GO:0021700	developmental maturation	IEP	HCCA
CC	GO:0030054	cell junction	IEP	HCCA
CC	GO:0030117	membrane coat	IEP	HCCA
CC	GO:0030120	vesicle coat	IEP	HCCA
CC	GO:0030126	COPI vesicle coat	IEP	HCCA
BP	GO:0030163	protein catabolic process	IEP	HCCA
BP	GO:0030243	cellulose metabolic process	IEP	HCCA
BP	GO:0030244	cellulose biosynthetic process	IEP	HCCA
MF	GO:0030276	clathrin binding	IEP	HCCA
CC	GO:0030312	external encapsulating structure	IEP	HCCA
CC	GO:0031090	organelle membrane	IEP	HCCA
BP	GO:0031365	N-terminal protein amino acid modification	IEP	HCCA
CC	GO:0031410	cytoplasmic vesicle	IEP	HCCA
CC	GO:0031970	organelle envelope lumen	IEP	HCCA
CC	GO:0031982	vesicle	IEP	HCCA
CC	GO:0031984	organelle subcompartment	IEP	HCCA
CC	GO:0031985	Golgi cisterna	IEP	HCCA
MF	GO:0032561	guanyl ribonucleotide binding	IEP	HCCA
BP	GO:0032940	secretion by cell	IEP	HCCA
BP	GO:0033692	cellular polysaccharide biosynthetic process	IEP	HCCA
BP	GO:0034637	cellular carbohydrate biosynthetic process	IEP	HCCA
BP	GO:0035592	establishment of protein localization to extracellular region	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
BP	GO:0042732	D-xylose metabolic process	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
BP	GO:0043413	macromolecule glycosylation	IEP	HCCA
BP	GO:0043543	protein acylation	IEP	HCCA
BP	GO:0044042	glucan metabolic process	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	HCCA
BP	GO:0044264	cellular polysaccharide metabolic process	IEP	HCCA
CC	GO:0045275	respiratory chain complex III	IEP	HCCA
BP	GO:0046364	monosaccharide biosynthetic process	IEP	HCCA
BP	GO:0046686	response to cadmium ion	IEP	HCCA
BP	GO:0046903	secretion	IEP	HCCA
BP	GO:0047484	regulation of response to osmotic stress	IEP	HCCA
BP	GO:0048193	Golgi vesicle transport	IEP	HCCA
BP	GO:0048646	anatomical structure formation involved in morphogenesis	IEP	HCCA
BP	GO:0051273	beta-glucan metabolic process	IEP	HCCA
BP	GO:0051274	beta-glucan biosynthetic process	IEP	HCCA
BP	GO:0051603	proteolysis involved in protein catabolic process	IEP	HCCA
BP	GO:0052546	cell wall pectin metabolic process	IEP	HCCA
MF	GO:0060229	lipase activator activity	IEP	HCCA
CC	GO:0070069	cytochrome complex	IEP	HCCA
BP	GO:0070085	glycosylation	IEP	HCCA
CC	GO:0070161	anchoring junction	IEP	HCCA
BP	GO:0071692	protein localization to extracellular region	IEP	HCCA
BP	GO:0071704	organic substance metabolic process	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA
BP	GO:0080119	ER body organization	IEP	HCCA
CC	GO:0097708	intracellular vesicle	IEP	HCCA
CC	GO:0098588	bounding membrane of organelle	IEP	HCCA
CC	GO:0098791	Golgi apparatus subcompartment	IEP	HCCA
CC	GO:0098796	membrane protein complex	IEP	HCCA
BP	GO:0140352	export from cell	IEP	HCCA
MF	GO:0140358	P-type transmembrane transporter activity	IEP	HCCA
BP	GO:1901564	organonitrogen compound metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006652	Kelch_1	183	224
IPR000582	Acyl-CoA-binding_protein	15	99

External Links

No external refs found!

AT3G05420 (ACBP4)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation