AT3G05920

Description : Heavy metal transport/detoxification superfamily protein

Gene families : OG0001602 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001602_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G05920

Target	Alias	Description	ECC score	Gene Family Method
AT1G30473	No alias	Heavy metal transport/detoxification superfamily protein	0.06	OrthoFinder output from all 47 species
GSVIVT01028846001	No alias	Heavy metal-associated isoprenylated plant protein 39...	0.03	OrthoFinder output from all 47 species
GSVIVT01028847001	No alias	No description available	0.03	OrthoFinder output from all 47 species
GSVIVT01028974001	No alias	No description available	0.03	OrthoFinder output from all 47 species
Gb_05060	No alias	no hits & (original description: none)	0.06	OrthoFinder output from all 47 species
Gb_25183	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Gb_34631	No alias	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
Gb_35035	No alias	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
Gb_38465	No alias	no hits & (original description: none)	0.06	OrthoFinder output from all 47 species
LOC_Os01g48710.1	LOC_Os01g48710	no hits & (original description: none)	0.07	OrthoFinder output from all 47 species
LOC_Os03g03500.1	LOC_Os03g03500	Heavy metal-associated isoprenylated plant protein 39...	0.03	OrthoFinder output from all 47 species
LOC_Os04g57200.1	LOC_Os04g57200	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
LOC_Os10g36200.1	LOC_Os10g36200	no hits & (original description: none)	0.01	OrthoFinder output from all 47 species
MA_20255g0010	No alias	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species
MA_22012g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_23882g0010	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
MA_43035g0010	No alias	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species
MA_43035g0020	No alias	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species
MA_465568g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_6098g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_7901881g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_8395g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_93016g0010	No alias	no hits & (original description: none)	0.07	OrthoFinder output from all 47 species
MA_9477177g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Pir_g03765	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g27861	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g28033	ATACA10, CIF1, ACA10	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g34724	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Solyc03g007870.3.1	Solyc03g007870	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Zm00001e000191_P001	Zm00001e000191	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Zm00001e002188_P002	Zm00001e002188	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Zm00001e006611_P002	Zm00001e006611	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Zm00001e020167_P001	Zm00001e020167	no hits & (original description: none)	0.06	OrthoFinder output from all 47 species
Zm00001e041844_P001	Zm00001e041844	no hits & (original description: none)	0.06	OrthoFinder output from all 47 species
Zm00001e041878_P001	Zm00001e041878	Heavy metal-associated isoprenylated plant protein 39...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006694	steroid biosynthetic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008202	steroid metabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0010817	regulation of hormone levels	None	Extended
BP	GO:0016128	phytosteroid metabolic process	None	Extended
BP	GO:0016129	phytosteroid biosynthetic process	None	Extended
BP	GO:0016131	brassinosteroid metabolic process	None	Extended
BP	GO:0016132	brassinosteroid biosynthetic process	RCA	Interproscan
BP	GO:0042445	hormone metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901615	organic hydroxy compound metabolic process	None	Extended
BP	GO:1901617	organic hydroxy compound biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	IEP	HCCA
CC	GO:0000502	proteasome complex	IEP	HCCA
MF	GO:0003700	DNA-binding transcription factor activity	IEP	HCCA
MF	GO:0005372	water transmembrane transporter activity	IEP	HCCA
MF	GO:0005507	copper ion binding	IEP	HCCA
BP	GO:0006355	regulation of DNA-templated transcription	IEP	HCCA
BP	GO:0006810	transport	IEP	HCCA
BP	GO:0006811	monoatomic ion transport	IEP	HCCA
BP	GO:0006812	monoatomic cation transport	IEP	HCCA
BP	GO:0006825	copper ion transport	IEP	HCCA
BP	GO:0006826	iron ion transport	IEP	HCCA
BP	GO:0007154	cell communication	IEP	HCCA
CC	GO:0008180	COP9 signalosome	IEP	HCCA
BP	GO:0009267	cellular response to starvation	IEP	HCCA
BP	GO:0009692	ethylene metabolic process	IEP	HCCA
BP	GO:0009693	ethylene biosynthetic process	IEP	HCCA
BP	GO:0009734	auxin-activated signaling pathway	IEP	HCCA
BP	GO:0009804	coumarin metabolic process	IEP	HCCA
BP	GO:0009805	coumarin biosynthetic process	IEP	HCCA
BP	GO:0009806	lignan metabolic process	IEP	HCCA
BP	GO:0009807	lignan biosynthetic process	IEP	HCCA
MF	GO:0009815	1-aminocyclopropane-1-carboxylate oxidase activity	IEP	HCCA
BP	GO:0009889	regulation of biosynthetic process	IEP	HCCA
BP	GO:0009991	response to extracellular stimulus	IEP	HCCA
BP	GO:0010053	root epidermal cell differentiation	IEP	HCCA
BP	GO:0010106	cellular response to iron ion starvation	IEP	HCCA
BP	GO:0010167	response to nitrate	IEP	HCCA
MF	GO:0010283	pinoresinol reductase activity	IEP	HCCA
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	HCCA
MF	GO:0015250	water channel activity	IEP	HCCA
BP	GO:0015698	inorganic anion transport	IEP	HCCA
BP	GO:0015706	nitrate transmembrane transport	IEP	HCCA
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	IEP	HCCA
MF	GO:0016628	oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016715	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen	IEP	HCCA
MF	GO:0016846	carbon-sulfur lyase activity	IEP	HCCA
MF	GO:0016847	1-aminocyclopropane-1-carboxylate synthase activity	IEP	HCCA
CC	GO:0019005	SCF ubiquitin ligase complex	IEP	HCCA
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0019222	regulation of metabolic process	IEP	HCCA
BP	GO:0021700	developmental maturation	IEP	HCCA
BP	GO:0030001	metal ion transport	IEP	HCCA
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	HCCA
BP	GO:0031667	response to nutrient levels	IEP	HCCA
BP	GO:0031668	cellular response to extracellular stimulus	IEP	HCCA
BP	GO:0031669	cellular response to nutrient levels	IEP	HCCA
BP	GO:0042594	response to starvation	IEP	HCCA
BP	GO:0043449	cellular alkene metabolic process	IEP	HCCA
BP	GO:0043450	alkene biosynthetic process	IEP	HCCA
BP	GO:0048469	cell maturation	IEP	HCCA
BP	GO:0048764	trichoblast maturation	IEP	HCCA
BP	GO:0048765	root hair cell differentiation	IEP	HCCA
BP	GO:0051234	establishment of localization	IEP	HCCA
BP	GO:0051252	regulation of RNA metabolic process	IEP	HCCA
BP	GO:0055085	transmembrane transport	IEP	HCCA
BP	GO:0071496	cellular response to external stimulus	IEP	HCCA
BP	GO:0071695	anatomical structure maturation	IEP	HCCA
BP	GO:0080090	regulation of primary metabolic process	IEP	HCCA
BP	GO:0090627	plant epidermal cell differentiation	IEP	HCCA
BP	GO:0098660	inorganic ion transmembrane transport	IEP	HCCA
BP	GO:0098661	inorganic anion transmembrane transport	IEP	HCCA
BP	GO:0120251	hydrocarbon biosynthetic process	IEP	HCCA
BP	GO:0120252	hydrocarbon metabolic process	IEP	HCCA
BP	GO:0120254	olefinic compound metabolic process	IEP	HCCA
BP	GO:0120255	olefinic compound biosynthetic process	IEP	HCCA
MF	GO:0140110	transcription regulator activity	IEP	HCCA
BP	GO:1900673	olefin metabolic process	IEP	HCCA
BP	GO:1900674	olefin biosynthetic process	IEP	HCCA
BP	GO:1902025	nitrate import	IEP	HCCA
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	HCCA
CC	GO:1905368	peptidase complex	IEP	HCCA
CC	GO:1905369	endopeptidase complex	IEP	HCCA
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006121	HMA_dom	9	61

External Links

No external refs found!

AT3G05920

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation