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  5. AT3G06450

AT3G06450


Description : HCO3- transporter family


Gene families : OG0000669 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000669_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G06450

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00203390 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.03 OrthoFinder output from all 47 species
AMTR_s00096p00091060 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.03 OrthoFinder output from all 47 species
AT3G62270 No alias HCO3- transporter family 0.05 OrthoFinder output from all 47 species
Adi_g055272 No alias borate transporter *(BOR) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g056139 BOR1 borate transporter *(BOR) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g085925 No alias borate transporter *(BOR) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g18421 No alias borate transporter *(BOR) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g23647 No alias borate transporter *(BOR) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g13939 No alias borate transporter *(BOR) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene28026.t1 Aspi01Gene28026 borate transporter *(BOR) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g04720 No alias borate transporter *(BOR) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05853 No alias borate transporter *(BOR) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g25865 No alias borate transporter *(BOR) & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g19673 No alias borate transporter *(BOR) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g05031 No alias borate transporter *(BOR) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05953 No alias borate transporter *(BOR) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06017 No alias borate transporter *(BOR) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g08582 No alias borate transporter *(BOR) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01028186001 No alias Solute transport.carrier-mediated transport.APC... 0.08 OrthoFinder output from all 47 species
Mp4g00440.1 No alias borate transporter (BOR) 0.02 OrthoFinder output from all 47 species
Msp_g44540 No alias borate transporter *(BOR) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03044 No alias borate transporter *(BOR) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03809 No alias borate transporter *(BOR) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g40239 BOR1 borate transporter *(BOR) & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g04748 No alias borate transporter *(BOR) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0078.g017717 No alias borate transporter *(BOR) & original description: CDS=1-1821 0.04 OrthoFinder output from all 47 species
Spa_g08997 No alias borate transporter *(BOR) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g12922 No alias borate transporter *(BOR) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06776 No alias borate transporter *(BOR) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm ISM Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
MF GO:0015301 obsolete anion:anion antiporter activity ISS Interproscan
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005911 cell-cell junction IEP HCCA
BP GO:0007020 microtubule nucleation IEP HCCA
BP GO:0007389 pattern specification process IEP HCCA
CC GO:0009506 plasmodesma IEP HCCA
BP GO:0009624 response to nematode IEP HCCA
BP GO:0009799 specification of symmetry IEP HCCA
BP GO:0009832 plant-type cell wall biogenesis IEP HCCA
BP GO:0009855 determination of bilateral symmetry IEP HCCA
BP GO:0009886 post-embryonic animal morphogenesis IEP HCCA
BP GO:0009887 animal organ morphogenesis IEP HCCA
BP GO:0009908 flower development IEP HCCA
BP GO:0010016 shoot system morphogenesis IEP HCCA
BP GO:0010051 xylem and phloem pattern formation IEP HCCA
BP GO:0010154 fruit development IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
CC GO:0030054 cell junction IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0048438 floral whorl development IEP HCCA
BP GO:0048439 flower morphogenesis IEP HCCA
BP GO:0048467 gynoecium development IEP HCCA
BP GO:0048507 meristem development IEP HCCA
BP GO:0050793 regulation of developmental process IEP HCCA
CC GO:0070161 anchoring junction IEP HCCA
BP GO:0090567 reproductive shoot system development IEP HCCA
BP GO:0090698 post-embryonic plant morphogenesis IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR011531 HCO3_transpt-like_TM_dom 7 180
IPR011531 HCO3_transpt-like_TM_dom 457 547
IPR011531 HCO3_transpt-like_TM_dom 205 374
No external refs found!