AT3G06620

Description : PAS domain-containing protein tyrosine kinase family protein

Gene families : OG0000173 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000173_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G06620

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00003p00081550	evm_27.TU.AmTr_v1...	Protein modification.phosphorylation.TKL kinase...	0.03	OrthoFinder output from all 47 species
AMTR_s00004p00023800	ATEDR1, EDR1,...	Protein modification.phosphorylation.TKL kinase...	0.02	OrthoFinder output from all 47 species
Adi_g055210	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Adi_g059775	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Adi_g087787	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g05496	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Aev_g08222	CTR1, AtCTR1, SIS1	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Aev_g09258	CTR1, AtCTR1, SIS1	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Als_g06379	CTR1, AtCTR1, SIS1	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Als_g33354	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Cba_g02703	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Ceric.07G050200.1	Ceric.07G050200	EC_2.7 transferase transferring phosphorus-containing...	0.04	OrthoFinder output from all 47 species
Ceric.10G005600.1	Ceric.10G005600	EC_2.7 transferase transferring phosphorus-containing...	0.04	OrthoFinder output from all 47 species
Ceric.14G070100.1	Ceric.14G070100	EC_2.7 transferase transferring phosphorus-containing...	0.05	OrthoFinder output from all 47 species
Ceric.23G051500.1	CTR1, AtCTR1,...	EC_2.7 transferase transferring phosphorus-containing...	0.04	OrthoFinder output from all 47 species
Cre03.g194100	No alias	Protein modification.phosphorylation.TKL kinase...	0.01	OrthoFinder output from all 47 species
GSVIVT01008413001	No alias	Protein modification.phosphorylation.TKL kinase...	0.04	OrthoFinder output from all 47 species
GSVIVT01021884001	ATEDR1, EDR1	Protein modification.phosphorylation.TKL kinase...	0.03	OrthoFinder output from all 47 species
GSVIVT01033779001	CTR1, AtCTR1, SIS1	Protein modification.phosphorylation.TKL kinase...	0.07	OrthoFinder output from all 47 species
GSVIVT01034710001	CTR1, AtCTR1, SIS1	Protein modification.phosphorylation.TKL kinase...	0.06	OrthoFinder output from all 47 species
Gb_11687	CTR1, AtCTR1, SIS1	protein kinase (MAP3K-RAF)	0.04	OrthoFinder output from all 47 species
Gb_16362	CTR1, AtCTR1, SIS1	protein kinase (MAP3K-RAF)	0.02	OrthoFinder output from all 47 species
Gb_21831	No alias	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species
Gb_40236	No alias	Probable serine/threonine-protein kinase SIS8...	0.03	OrthoFinder output from all 47 species
LOC_Os02g12810.1	LOC_Os02g12810	protein kinase (MAP3K-RAF)	0.04	OrthoFinder output from all 47 species
LOC_Os02g50970.1	LOC_Os02g50970	protein kinase (MAP3K-RAF)	0.04	OrthoFinder output from all 47 species
LOC_Os03g06410.1	ATEDR1, EDR1,...	protein kinase (MAP3K-RAF)	0.04	OrthoFinder output from all 47 species
LOC_Os12g37570.1	LOC_Os12g37570	protein kinase (MAP3K-RAF)	0.06	OrthoFinder output from all 47 species
Lfl_g07413	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Lfl_g12771	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.04	OrthoFinder output from all 47 species
MA_10426911g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_10431625g0010	No alias	Probable serine/threonine-protein kinase SIS8...	0.05	OrthoFinder output from all 47 species
MA_125717g0010	CTR1, AtCTR1, SIS1	Serine/threonine-protein kinase CTR1 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
MA_35694g0010	CTR1, AtCTR1, SIS1	protein kinase (MAP3K-RAF)	0.02	OrthoFinder output from all 47 species
MA_7128934g0010	No alias	protein kinase (MAP3K-RAF)	0.04	OrthoFinder output from all 47 species
Msp_g15629	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Msp_g21427	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Smo40493	No alias	Protein modification.phosphorylation.TKL kinase...	0.03	OrthoFinder output from all 47 species
Solyc01g059860.3.1	Solyc01g059860	protein kinase (MAP3K-RAF)	0.05	OrthoFinder output from all 47 species
Solyc01g097980.3.1	ATEDR1, EDR1,...	protein kinase (MAP3K-RAF)	0.05	OrthoFinder output from all 47 species
Solyc09g009090.3.1	CTR1, AtCTR1,...	protein kinase (CTR1). protein kinase (MAP3K-RAF)	0.06	OrthoFinder output from all 47 species
Solyc10g083610.2.1	CTR1, AtCTR1,...	protein kinase (CTR1). protein kinase (MAP3K-RAF)	0.04	OrthoFinder output from all 47 species
Tin_g09221	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.04	OrthoFinder output from all 47 species
Zm00001e002883_P001	Zm00001e002883	protein kinase (MAP3K-RAF)	0.04	OrthoFinder output from all 47 species
Zm00001e009483_P001	CTR1, AtCTR1,...	protein kinase (CTR1). protein kinase (MAP3K-RAF)	0.06	OrthoFinder output from all 47 species
Zm00001e015802_P001	Zm00001e015802	protein kinase (MAP3K-RAF)	0.09	OrthoFinder output from all 47 species
Zm00001e039005_P001	ATEDR1, EDR1,...	protein kinase (MAP3K-RAF)	0.08	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000956	nuclear-transcribed mRNA catabolic process	RCA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	None	Extended
MF	GO:0004712	protein serine/threonine/tyrosine kinase activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006401	RNA catabolic process	None	Extended
BP	GO:0006402	mRNA catabolic process	None	Extended
BP	GO:0006468	protein phosphorylation	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009892	negative regulation of metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010155	regulation of proton transport	RCA	Interproscan
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010605	negative regulation of macromolecule metabolic process	None	Extended
BP	GO:0010629	negative regulation of gene expression	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016071	mRNA metabolic process	None	Extended
MF	GO:0016301	kinase activity	ISS	Interproscan
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019439	aromatic compound catabolic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0032879	regulation of localization	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034655	nucleobase-containing compound catabolic process	None	Extended
BP	GO:0034762	regulation of transmembrane transport	None	Extended
BP	GO:0034765	regulation of monoatomic ion transmembrane transport	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043269	regulation of monoatomic ion transport	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
BP	GO:0044270	cellular nitrogen compound catabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0046700	heterocycle catabolic process	None	Extended
BP	GO:0046777	protein autophosphorylation	RCA	Interproscan
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051049	regulation of transport	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901361	organic cyclic compound catabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended
BP	GO:1904062	regulation of monoatomic cation transmembrane transport	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000165	MAPK cascade	IEP	HCCA
BP	GO:0002682	regulation of immune system process	IEP	HCCA
BP	GO:0002831	regulation of response to biotic stimulus	IEP	HCCA
MF	GO:0005216	monoatomic ion channel activity	IEP	HCCA
MF	GO:0005516	calmodulin binding	IEP	HCCA
BP	GO:0006497	protein lipidation	IEP	HCCA
BP	GO:0006498	N-terminal protein lipidation	IEP	HCCA
BP	GO:0006499	N-terminal protein myristoylation	IEP	HCCA
BP	GO:0006612	protein targeting to membrane	IEP	HCCA
BP	GO:0007154	cell communication	IEP	HCCA
BP	GO:0009409	response to cold	IEP	HCCA
BP	GO:0009620	response to fungus	IEP	HCCA
BP	GO:0009723	response to ethylene	IEP	HCCA
BP	GO:0009738	abscisic acid-activated signaling pathway	IEP	HCCA
BP	GO:0009743	response to carbohydrate	IEP	HCCA
BP	GO:0009791	post-embryonic development	IEP	HCCA
BP	GO:0009862	systemic acquired resistance, salicylic acid mediated signaling pathway	IEP	HCCA
BP	GO:0009863	salicylic acid mediated signaling pathway	IEP	HCCA
BP	GO:0009867	jasmonic acid mediated signaling pathway	IEP	HCCA
BP	GO:0010363	regulation of plant-type hypersensitive response	IEP	HCCA
BP	GO:0010941	regulation of cell death	IEP	HCCA
MF	GO:0015075	monoatomic ion transmembrane transporter activity	IEP	HCCA
MF	GO:0015267	channel activity	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
BP	GO:0018377	protein myristoylation	IEP	HCCA
MF	GO:0022803	passive transmembrane transporter activity	IEP	HCCA
MF	GO:0030551	cyclic nucleotide binding	IEP	HCCA
BP	GO:0030968	endoplasmic reticulum unfolded protein response	IEP	HCCA
BP	GO:0031347	regulation of defense response	IEP	HCCA
BP	GO:0031348	negative regulation of defense response	IEP	HCCA
BP	GO:0031365	N-terminal protein amino acid modification	IEP	HCCA
BP	GO:0032101	regulation of response to external stimulus	IEP	HCCA
BP	GO:0033037	polysaccharide localization	IEP	HCCA
BP	GO:0034976	response to endoplasmic reticulum stress	IEP	HCCA
BP	GO:0035556	intracellular signal transduction	IEP	HCCA
BP	GO:0043067	regulation of programmed cell death	IEP	HCCA
BP	GO:0043069	negative regulation of programmed cell death	IEP	HCCA
BP	GO:0043543	protein acylation	IEP	HCCA
BP	GO:0043903	regulation of biological process involved in symbiotic interaction	IEP	HCCA
BP	GO:0045088	regulation of innate immune response	IEP	HCCA
BP	GO:0048193	Golgi vesicle transport	IEP	HCCA
BP	GO:0048364	root development	IEP	HCCA
BP	GO:0048523	negative regulation of cellular process	IEP	HCCA
BP	GO:0048527	lateral root development	IEP	HCCA
BP	GO:0048528	post-embryonic root development	IEP	HCCA
BP	GO:0048585	negative regulation of response to stimulus	IEP	HCCA
BP	GO:0050776	regulation of immune response	IEP	HCCA
BP	GO:0050832	defense response to fungus	IEP	HCCA
BP	GO:0051668	localization within membrane	IEP	HCCA
BP	GO:0052542	defense response by callose deposition	IEP	HCCA
BP	GO:0052545	callose localization	IEP	HCCA
BP	GO:0060548	negative regulation of cell death	IEP	HCCA
BP	GO:0072657	protein localization to membrane	IEP	HCCA
BP	GO:0080134	regulation of response to stress	IEP	HCCA
BP	GO:0080135	regulation of cellular response to stress	IEP	HCCA
BP	GO:0090150	establishment of protein localization to membrane	IEP	HCCA
BP	GO:0090696	post-embryonic plant organ development	IEP	HCCA
BP	GO:0099402	plant organ development	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013767	PAS_fold	104	210
IPR001245	Ser-Thr/Tyr_kinase_cat_dom	494	746

External Links

No external refs found!

AT3G06620

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation