AT3G07040 (RPM1, RPS3)

Aliases : RPM1, RPS3

Description : NB-ARC domain-containing disease resistance protein

Gene families : OG0000422 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000422_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G07040

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00074p00193280	evm_27.TU.AmTr_v1...	Disease resistance protein RPM1 OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
AMTR_s00090p00137350	RPP13,...	Disease resistance protein RPP13 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
AMTR_s00190p00027950	RPM1, RPS3,...	Disease resistance protein RPM1 OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
AMTR_s00190p00029950	RPM1, RPS3,...	Disease resistance protein RPM1 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
AT1G10920	LOV1	NB-ARC domain-containing disease resistance protein	0.08	OrthoFinder output from all 47 species
AT1G50180	No alias	NB-ARC domain-containing disease resistance protein	0.09	OrthoFinder output from all 47 species
AT1G58390	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.05	OrthoFinder output from all 47 species
AT1G58400	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.19	OrthoFinder output from all 47 species
AT1G58410	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.21	OrthoFinder output from all 47 species
AT1G58602	No alias	LRR and NB-ARC domains-containing disease resistance protein	0.07	OrthoFinder output from all 47 species
AT1G58807	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.08	OrthoFinder output from all 47 species
AT1G58848	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.03	OrthoFinder output from all 47 species
AT1G59124	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.08	OrthoFinder output from all 47 species
AT1G59218	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.03	OrthoFinder output from all 47 species
AT1G59780	No alias	NB-ARC domain-containing disease resistance protein	0.04	OrthoFinder output from all 47 species
AT3G46530	RPP13	NB-ARC domain-containing disease resistance protein	0.09	OrthoFinder output from all 47 species
AT3G46710	No alias	NB-ARC domain-containing disease resistance protein	0.09	OrthoFinder output from all 47 species
AT5G35450	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.07	OrthoFinder output from all 47 species
AT5G43470	HRT, RCY1, RPP8	Disease resistance protein (CC-NBS-LRR class) family	0.04	OrthoFinder output from all 47 species
AT5G48620	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.04	OrthoFinder output from all 47 species
Adi_g060852	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g062378	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aob_g22709	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01012165001	RPM1, RPS3	Disease resistance protein RPM1 OS=Arabidopsis thaliana	0.07	OrthoFinder output from all 47 species
GSVIVT01012167001	RPM1, RPS3	Disease resistance protein RPM1 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
GSVIVT01024101001	RPP13	Disease resistance protein RPP13 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
GSVIVT01026725001	No alias	Putative disease resistance protein At1g50180...	0.1	OrthoFinder output from all 47 species
GSVIVT01026728001	No alias	Disease resistance RPP8-like protein 3 OS=Arabidopsis thaliana	0.07	OrthoFinder output from all 47 species
GSVIVT01026740001	No alias	Putative disease resistance protein At1g50180...	0.04	OrthoFinder output from all 47 species
GSVIVT01026742001	No alias	Putative disease resistance protein At1g50180...	0.07	OrthoFinder output from all 47 species
GSVIVT01026745001	No alias	Putative disease resistance protein At1g50180...	0.06	OrthoFinder output from all 47 species
GSVIVT01026747001	No alias	Putative disease resistance protein At1g50180...	0.07	OrthoFinder output from all 47 species
GSVIVT01026750001	HRT, RCY1, RPP8	Disease resistance protein RPP8 OS=Arabidopsis thaliana	0.1	OrthoFinder output from all 47 species
GSVIVT01032830001	No alias	Probable disease resistance RPP8-like protein 2...	0.04	OrthoFinder output from all 47 species
Gb_25815	No alias	Putative disease resistance protein RGA3 OS=Solanum...	0.05	OrthoFinder output from all 47 species
Gb_40740	RPM1, RPS3	Putative disease resistance protein RGA3 OS=Solanum...	0.04	OrthoFinder output from all 47 species
LOC_Os01g23380.1	RPP13, LOC_Os01g23380	no description available(sp\|p0do08\|pikm2_orysj : 348.0)	0.02	OrthoFinder output from all 47 species
LOC_Os07g12680.1	LOC_Os07g12680	no description available(sp\|f7j0n2\|rga5r_orysj : 105.0)	0.03	OrthoFinder output from all 47 species
LOC_Os09g09490.1	RPM1, RPS3,...	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.05	OrthoFinder output from all 47 species
LOC_Os11g11770.1	RPM1, RPS3,...	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
LOC_Os11g11960.1	RPM1, RPS3,...	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
LOC_Os11g11990.1	RPM1, RPS3,...	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
LOC_Os11g12050.2	RPM1, RPS3,...	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.05	OrthoFinder output from all 47 species
LOC_Os11g12350.1	LOC_Os11g12350	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
LOC_Os11g13440.1	LOC_Os11g13440	no description available(sp\|q2r8l1\|rga5s_orysj : 304.0)	0.02	OrthoFinder output from all 47 species
LOC_Os11g16470.2	LOC_Os11g16470	no description available(sp\|q2r8l1\|rga5s_orysj : 400.0)	0.02	OrthoFinder output from all 47 species
LOC_Os11g17330.1	LOC_Os11g17330	no description available(sp\|q2r8l1\|rga5s_orysj : 391.0)	0.03	OrthoFinder output from all 47 species
LOC_Os12g37770.1	LOC_Os12g37770	no description available(sp\|f7j0n2\|rga5r_orysj : 437.0)	0.07	OrthoFinder output from all 47 species
Solyc02g084890.3.1	ZAR1, Solyc02g084890	Disease resistance RPP13-like protein 4 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Solyc04g009690.2.1	RPP13, Solyc04g009690	Disease resistance protein RPP13 OS=Arabidopsis thaliana...	0.06	OrthoFinder output from all 47 species
Solyc10g008220.4.1	Solyc10g008220	Putative late blight resistance protein homolog R1A-6...	0.05	OrthoFinder output from all 47 species
Zm00001e010878_P001	RPM1, RPS3,...	no description available(sp\|q2r8l1\|rga5s_orysj : 230.0)	0.03	OrthoFinder output from all 47 species
Zm00001e011204_P001	Zm00001e011204	no description available(sp\|q2r8l1\|rga5s_orysj : 371.0)	0.03	OrthoFinder output from all 47 species
Zm00001e013150_P001	RPM1, RPS3,...	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.05	OrthoFinder output from all 47 species
Zm00001e030083_P004	ZAR1, Zm00001e030083	no description available(sp\|q2r8l1\|rga5s_orysj : 364.0)	0.05	OrthoFinder output from all 47 species
Zm00001e039751_P001	RPM1, RPS3,...	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	ISS	Interproscan
BP	GO:0002376	immune system process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005886	plasma membrane	IDA	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	ISS	Interproscan
BP	GO:0006952	defense response	TAS	Interproscan
BP	GO:0006955	immune response	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008219	cell death	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009626	plant-type hypersensitive response	IDA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0012501	programmed cell death	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034050	programmed cell death induced by symbiont	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
BP	GO:0044403	biological process involved in symbiotic interaction	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0045087	innate immune response	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051702	biological process involved in interaction with symbiont	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0098542	defense response to other organism	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	177	425

External Links

No external refs found!

AT3G07040 (RPM1, RPS3)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation