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  5. Pnu_g30107

Pnu_g30107 (OTP84)


Aliases : OTP84

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g30107
Cluster HCCA: Cluster_116

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00145640 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g22070... 0.03 OrthoFinder output from all 47 species
AMTR_s00045p00048330 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g53360,... 0.03 OrthoFinder output from all 47 species
AMTR_s00069p00058270 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g39530... 0.03 OrthoFinder output from all 47 species
Adi_g002365 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g005699 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g015699 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g036768 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g052188 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g060808 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g086048 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g27991 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g32925 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g46569 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12481 OTP82 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g24418 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g35854 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g22581 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g27283 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g40241 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g38090 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene01610.t1 CRR22, Aspi01Gene01610 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene19894.t1 Aspi01Gene19894 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene42015.t1 Aspi01Gene42015 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0003.g007914 EMB2758 not classified & original description: CDS=1-2235 0.05 OrthoFinder output from all 47 species
Cba_g05272 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001657.6 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g05194 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g16108 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g06332 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g25879 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01003766001 LPA66 Pentatricopeptide repeat-containing protein At1g08070,... 0.03 OrthoFinder output from all 47 species
Len_g05421 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g03915 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g12042 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g17708 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g20115 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28343 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g31656 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g31739 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g05790 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g21358 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g02088 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25436 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g26038 EMB2261 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g26310 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g34280 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g19172 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63456 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g22228 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g30507 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0016.g006956 No alias not classified & original description: CDS=1-2820 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010161 No alias not classified & original description: CDS=1-2802 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0059.g015038 CRR22 not classified & original description: CDS=1-1620 0.03 OrthoFinder output from all 47 species
Sam_g16549 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Smo76236 No alias Pentatricopeptide repeat-containing protein ELI1,... 0.03 OrthoFinder output from all 47 species
Smo97289 No alias Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
Solyc02g069500.1.1 Solyc02g069500 Pentatricopeptide repeat-containing protein At4g21300... 0.03 OrthoFinder output from all 47 species
Tin_g06389 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g26884 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g27069 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR032867 DYW_dom 501 593
IPR002885 Pentatricopeptide_repeat 84 131
IPR002885 Pentatricopeptide_repeat 184 231
IPR002885 Pentatricopeptide_repeat 286 332
IPR002885 Pentatricopeptide_repeat 24 54
IPR002885 Pentatricopeptide_repeat 260 285
IPR002885 Pentatricopeptide_repeat 2 23
IPR002885 Pentatricopeptide_repeat 361 384
IPR046848 E_motif 403 465
No external refs found!