AT3G07390 (AIR12)

Aliases : AIR12

Description : auxin-responsive family protein

Gene families : OG0000289 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000289_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G07390
Cluster	HCCA: Cluster_115

Target	Alias	Description	ECC score	Gene Family Method
Als_g08822	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.03G095900.1	Ceric.03G095900	not classified & original description: pacid=50571249...	0.03	OrthoFinder output from all 47 species
Dac_g13009	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g18311	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01006721001	No alias	Cytochrome b561 and DOMON domain-containing protein...	0.02	OrthoFinder output from all 47 species
Gb_13627	No alias	Cytochrome b561 and DOMON domain-containing protein...	0.04	OrthoFinder output from all 47 species
MA_809519g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0040.g012428	No alias	not classified & original description: CDS=1-669	0.02	OrthoFinder output from all 47 species
Smo101207	No alias	Cytochrome b561 and DOMON domain-containing protein...	0.04	OrthoFinder output from all 47 species
Solyc05g041910.3.1	Solyc05g041910	Cytochrome b561 and DOMON domain-containing protein...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005198	structural molecule activity	None	Extended
MF	GO:0005201	extracellular matrix structural constituent	TAS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	TAS	Interproscan
CC	GO:0005886	plasma membrane	IDA	Interproscan
CC	GO:0005886	plasma membrane	ISM	Interproscan
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005996	monosaccharide metabolic process	None	Extended
BP	GO:0006006	glucose metabolic process	None	Extended
BP	GO:0006007	glucose catabolic process	RCA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009733	response to auxin	IEP	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010015	root morphogenesis	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010101	post-embryonic root morphogenesis	None	Extended
BP	GO:0010102	lateral root morphogenesis	IEP	Interproscan
CC	GO:0016020	membrane	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016052	carbohydrate catabolic process	None	Extended
BP	GO:0019318	hexose metabolic process	None	Extended
BP	GO:0019320	hexose catabolic process	None	Extended
BP	GO:0030198	extracellular matrix organization	TAS	Interproscan
CC	GO:0031225	obsolete anchored component of membrane	TAS	Interproscan
BP	GO:0032502	developmental process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0043062	extracellular structure organization	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044282	small molecule catabolic process	None	Extended
BP	GO:0045229	external encapsulating structure organization	None	Extended
BP	GO:0046365	monosaccharide catabolic process	None	Extended
CC	GO:0046658	obsolete anchored component of plasma membrane	IDA	Interproscan
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0090697	post-embryonic plant organ morphogenesis	None	Extended
BP	GO:0090698	post-embryonic plant morphogenesis	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended
BP	GO:1905392	plant organ morphogenesis	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006950	response to stress	IEP	HCCA
BP	GO:0006952	defense response	IEP	HCCA
BP	GO:0009611	response to wounding	IEP	HCCA
BP	GO:0009698	phenylpropanoid metabolic process	IEP	HCCA
BP	GO:0009699	phenylpropanoid biosynthetic process	IEP	HCCA
BP	GO:0009804	coumarin metabolic process	IEP	HCCA
BP	GO:0009805	coumarin biosynthetic process	IEP	HCCA
BP	GO:0009962	regulation of flavonoid biosynthetic process	IEP	HCCA
BP	GO:0009963	positive regulation of flavonoid biosynthetic process	IEP	HCCA
MF	GO:0016207	4-coumarate-CoA ligase activity	IEP	HCCA
MF	GO:0016405	CoA-ligase activity	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0016877	ligase activity, forming carbon-sulfur bonds	IEP	HCCA
MF	GO:0016878	acid-thiol ligase activity	IEP	HCCA
BP	GO:0033037	polysaccharide localization	IEP	HCCA
BP	GO:0042991	obsolete transcription factor import into nucleus	IEP	HCCA
BP	GO:0044550	secondary metabolite biosynthetic process	IEP	HCCA
BP	GO:0052542	defense response by callose deposition	IEP	HCCA
BP	GO:0052545	callose localization	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005018	DOMON_domain	112	212

External Links

No external refs found!

AT3G07390 (AIR12)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation