AT3G08850 (RAPTOR1, ATRAPTOR1B, RAPTOR1B)

Aliases : RAPTOR1, ATRAPTOR1B, RAPTOR1B

Description : HEAT repeat ;WD domain, G-beta repeat protein protein

Gene families : OG0002561 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002561_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G08850

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00007p00205840	RAPTOR1,...	Multi-process regulation.TOR signalling pathway.TORC...	0.02	OrthoFinder output from all 47 species
Aev_g01613	RAPTOR1,...	regulatory component *(RAPTOR) of TORC complex &...	0.03	OrthoFinder output from all 47 species
Aob_g07434	RAPTOR1,...	regulatory component *(RAPTOR) of TORC complex &...	0.02	OrthoFinder output from all 47 species
Aspi01Gene00551.t1	RAPTOR1,...	regulatory component *(RAPTOR) of TORC complex &...	0.08	OrthoFinder output from all 47 species
Aspi01Gene00553.t1	RAPTOR1,...	regulatory component *(RAPTOR) of TORC complex &...	0.03	OrthoFinder output from all 47 species
Aspi01Gene00555.t1	RAPTOR1,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0056.g034101	RAPTOR1,...	regulatory component *(RAPTOR) of TORC complex &...	0.03	OrthoFinder output from all 47 species
Ceric.16G026500.1	RAPTOR1,...	regulatory component *(RAPTOR) of TORC complex &...	0.15	OrthoFinder output from all 47 species
Cre08.g371957	RAPTOR1,...	Multi-process regulation.TOR signalling pathway.TORC...	0.04	OrthoFinder output from all 47 species
Dcu_g13864	RAPTOR1,...	regulatory component *(RAPTOR) of TORC complex &...	0.07	OrthoFinder output from all 47 species
Dde_g05966	RAPTOR1,...	regulatory component *(RAPTOR) of TORC complex &...	0.06	OrthoFinder output from all 47 species
Gb_09312	RAPTOR1,...	regulatory component RAPTOR of TORC complex	0.13	OrthoFinder output from all 47 species
LOC_Os11g01872.1	RAPTOR1,...	regulatory component RAPTOR of TORC complex	0.15	OrthoFinder output from all 47 species
LOC_Os12g01922.1	RAPTOR1,...	regulatory component RAPTOR of TORC complex	0.11	OrthoFinder output from all 47 species
Len_g14165	RAPTOR1,...	regulatory component *(RAPTOR) of TORC complex &...	0.08	OrthoFinder output from all 47 species
Lfl_g11715	RAPTOR1,...	regulatory component *(RAPTOR) of TORC complex &...	0.06	OrthoFinder output from all 47 species
MA_55646g0010	RAPTOR1,...	Regulatory-associated protein of TOR 1 OS=Arabidopsis...	0.1	OrthoFinder output from all 47 species
MA_72346g0010	RAPTOR1,...	regulatory component RAPTOR of TORC complex	0.11	OrthoFinder output from all 47 species
Mp1g26150.1	RAPTOR1,...	regulatory component RAPTOR of TORC complex	0.04	OrthoFinder output from all 47 species
Msp_g32505	RAPTOR1,...	regulatory component *(RAPTOR) of TORC complex &...	0.03	OrthoFinder output from all 47 species
Ore_g35735	RAPTOR1,...	regulatory component *(RAPTOR) of TORC complex &...	0.08	OrthoFinder output from all 47 species
Ppi_g08142	RAPTOR1,...	regulatory component *(RAPTOR) of TORC complex &...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0062.g015468	RAPTOR1,...	regulatory component *(RAPTOR) of TORC complex &...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0713.g027625	RAPTOR1,...	regulatory component *(RAPTOR) of TORC complex &...	0.04	OrthoFinder output from all 47 species
Sam_g29252	No alias	regulatory component *(RAPTOR) of TORC complex &...	0.05	OrthoFinder output from all 47 species
Smo171199	RAPTOR1,...	Multi-process regulation.TOR signalling pathway.TORC...	0.04	OrthoFinder output from all 47 species
Solyc09g014780.3.1	RAPTOR1,...	regulatory component RAPTOR of TORC complex	0.1	OrthoFinder output from all 47 species
Solyc10g076260.2.1	RAPTOR1,...	regulatory component RAPTOR of TORC complex	0.01	OrthoFinder output from all 47 species
Tin_g04194	RAPTOR1,...	regulatory component *(RAPTOR) of TORC complex &...	0.06	OrthoFinder output from all 47 species
Zm00001e009269_P001	RAPTOR1,...	regulatory component RAPTOR of TORC complex	0.1	OrthoFinder output from all 47 species
Zm00001e023957_P003	RAPTOR1,...	regulatory component RAPTOR of TORC complex	0.04	OrthoFinder output from all 47 species
Zm00001e039181_P001	RAPTOR1,...	regulatory component RAPTOR of TORC complex	0.11	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0000151	ubiquitin ligase complex	None	Extended
MF	GO:0000166	nucleotide binding	ISS	Interproscan
BP	GO:0000910	cytokinesis	None	Extended
BP	GO:0000911	cytokinesis by cell plate formation	RCA	Interproscan
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006486	protein glycosylation	RCA	Interproscan
BP	GO:0006487	protein N-linked glycosylation	RCA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007062	sister chromatid cohesion	RCA	Interproscan
BP	GO:0007275	multicellular organism development	None	Extended
BP	GO:0007389	pattern specification process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009790	embryo development	None	Extended
BP	GO:0009793	embryo development ending in seed dormancy	IMP	Interproscan
BP	GO:0009793	embryo development ending in seed dormancy	RCA	Interproscan
BP	GO:0009880	embryonic pattern specification	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010014	meristem initiation	None	Extended
BP	GO:0010072	primary shoot apical meristem specification	RCA	Interproscan
BP	GO:0010228	vegetative to reproductive phase transition of meristem	RCA	Interproscan
BP	GO:0010431	seed maturation	RCA	Interproscan
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016049	cell growth	IMP	Interproscan
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0021700	developmental maturation	None	Extended
BP	GO:0022402	cell cycle process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
CC	GO:0031461	cullin-RING ubiquitin ligase complex	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0040007	growth	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043413	macromolecule glycosylation	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0045595	regulation of cell differentiation	RCA	Interproscan
BP	GO:0048609	multicellular organismal reproductive process	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051276	chromosome organization	None	Extended
BP	GO:0051301	cell division	RCA	Interproscan
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070085	glycosylation	None	Extended
BP	GO:0071695	anatomical structure maturation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
CC	GO:0080008	Cul4-RING E3 ubiquitin ligase complex	ISS	Interproscan
BP	GO:0090421	embryonic meristem initiation	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0140535	intracellular protein-containing complex	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1990234	transferase complex	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
CC	GO:0000932	P-body	IEP	HCCA
MF	GO:0000976	transcription cis-regulatory region binding	IEP	HCCA
MF	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding	IEP	HCCA
MF	GO:0000979	RNA polymerase II core promoter sequence-specific DNA binding	IEP	HCCA
MF	GO:0001046	core promoter sequence-specific DNA binding	IEP	HCCA
MF	GO:0001067	transcription regulatory region nucleic acid binding	IEP	HCCA
MF	GO:0003690	double-stranded DNA binding	IEP	HCCA
MF	GO:0003725	double-stranded RNA binding	IEP	HCCA
MF	GO:0004519	endonuclease activity	IEP	HCCA
MF	GO:0004521	endoribonuclease activity	IEP	HCCA
MF	GO:0004525	ribonuclease III activity	IEP	HCCA
MF	GO:0004540	ribonuclease activity	IEP	HCCA
MF	GO:0005543	phospholipid binding	IEP	HCCA
CC	GO:0005634	nucleus	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006351	DNA-templated transcription	IEP	HCCA
BP	GO:0006366	transcription by RNA polymerase II	IEP	HCCA
BP	GO:0006401	RNA catabolic process	IEP	HCCA
BP	GO:0006402	mRNA catabolic process	IEP	HCCA
BP	GO:0006417	regulation of translation	IEP	HCCA
BP	GO:0006723	cuticle hydrocarbon biosynthetic process	IEP	HCCA
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	HCCA
MF	GO:0008022	protein C-terminus binding	IEP	HCCA
MF	GO:0008420	RNA polymerase II CTD heptapeptide repeat phosphatase activity	IEP	HCCA
BP	GO:0009059	macromolecule biosynthetic process	IEP	HCCA
BP	GO:0009303	rRNA transcription	IEP	HCCA
BP	GO:0009314	response to radiation	IEP	HCCA
BP	GO:0009416	response to light stimulus	IEP	HCCA
CC	GO:0009527	plastid outer membrane	IEP	HCCA
BP	GO:0009606	tropism	IEP	HCCA
BP	GO:0009628	response to abiotic stimulus	IEP	HCCA
BP	GO:0009629	response to gravity	IEP	HCCA
BP	GO:0009630	gravitropism	IEP	HCCA
BP	GO:0009639	response to red or far red light	IEP	HCCA
CC	GO:0009707	chloroplast outer membrane	IEP	HCCA
BP	GO:0009787	regulation of abscisic acid-activated signaling pathway	IEP	HCCA
BP	GO:0009788	negative regulation of abscisic acid-activated signaling pathway	IEP	HCCA
BP	GO:0009791	post-embryonic development	IEP	HCCA
BP	GO:0009889	regulation of biosynthetic process	IEP	HCCA
BP	GO:0009891	positive regulation of biosynthetic process	IEP	HCCA
BP	GO:0009892	negative regulation of metabolic process	IEP	HCCA
BP	GO:0009893	positive regulation of metabolic process	IEP	HCCA
BP	GO:0009894	regulation of catabolic process	IEP	HCCA
BP	GO:0009895	negative regulation of catabolic process	IEP	HCCA
BP	GO:0009896	positive regulation of catabolic process	IEP	HCCA
BP	GO:0009968	negative regulation of signal transduction	IEP	HCCA
BP	GO:0010019	chloroplast-nucleus signaling pathway	IEP	HCCA
BP	GO:0010050	vegetative phase change	IEP	HCCA
BP	GO:0010071	root meristem specification	IEP	HCCA
BP	GO:0010098	suspensor development	IEP	HCCA
CC	GO:0010445	nuclear dicing body	IEP	HCCA
BP	GO:0010468	regulation of gene expression	IEP	HCCA
BP	GO:0010506	regulation of autophagy	IEP	HCCA
BP	GO:0010507	negative regulation of autophagy	IEP	HCCA
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	HCCA
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	IEP	HCCA
BP	GO:0010599	lsiRNA processing	IEP	HCCA
BP	GO:0010604	positive regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0010605	negative regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0010629	negative regulation of gene expression	IEP	HCCA
BP	GO:0010638	positive regulation of organelle organization	IEP	HCCA
BP	GO:0010648	negative regulation of cell communication	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
BP	GO:0016071	mRNA metabolic process	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
MF	GO:0016303	1-phosphatidylinositol-3-kinase activity	IEP	HCCA
BP	GO:0016569	obsolete covalent chromatin modification	IEP	HCCA
CC	GO:0016604	nuclear body	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016891	endoribonuclease activity, producing 5'-phosphomonoesters	IEP	HCCA
MF	GO:0016893	endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	IEP	HCCA
BP	GO:0017148	negative regulation of translation	IEP	HCCA
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0019222	regulation of metabolic process	IEP	HCCA
BP	GO:0019439	aromatic compound catabolic process	IEP	HCCA
BP	GO:0023057	negative regulation of signaling	IEP	HCCA
BP	GO:0030307	positive regulation of cell growth	IEP	HCCA
BP	GO:0031053	primary miRNA processing	IEP	HCCA
BP	GO:0031087	deadenylation-independent decapping of nuclear-transcribed mRNA	IEP	HCCA
BP	GO:0031323	regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031324	negative regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031325	positive regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	HCCA
BP	GO:0031328	positive regulation of cellular biosynthetic process	IEP	HCCA
BP	GO:0031329	regulation of cellular catabolic process	IEP	HCCA
BP	GO:0031330	negative regulation of cellular catabolic process	IEP	HCCA
BP	GO:0031331	positive regulation of cellular catabolic process	IEP	HCCA
CC	GO:0031969	chloroplast membrane	IEP	HCCA
MF	GO:0032296	double-stranded RNA-specific ribonuclease activity	IEP	HCCA
BP	GO:0032774	RNA biosynthetic process	IEP	HCCA
BP	GO:0032870	cellular response to hormone stimulus	IEP	HCCA
BP	GO:0034248	regulation of amide metabolic process	IEP	HCCA
BP	GO:0034249	negative regulation of amide metabolic process	IEP	HCCA
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	HCCA
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	HCCA
BP	GO:0034655	nucleobase-containing compound catabolic process	IEP	HCCA
BP	GO:0034660	ncRNA metabolic process	IEP	HCCA
MF	GO:0035004	phosphatidylinositol 3-kinase activity	IEP	HCCA
MF	GO:0035091	phosphatidylinositol binding	IEP	HCCA
BP	GO:0035195	miRNA-mediated gene silencing	IEP	HCCA
BP	GO:0035279	miRNA-mediated gene silencing by mRNA destabilization	IEP	HCCA
CC	GO:0035770	ribonucleoprotein granule	IEP	HCCA
CC	GO:0036464	cytoplasmic ribonucleoprotein granule	IEP	HCCA
BP	GO:0040019	positive regulation of embryonic development	IEP	HCCA
MF	GO:0042802	identical protein binding	IEP	HCCA
MF	GO:0042803	protein homodimerization activity	IEP	HCCA
BP	GO:0043487	regulation of RNA stability	IEP	HCCA
BP	GO:0043488	regulation of mRNA stability	IEP	HCCA
MF	GO:0043621	protein self-association	IEP	HCCA
BP	GO:0044248	cellular catabolic process	IEP	HCCA
BP	GO:0044260	cellular macromolecule metabolic process	IEP	HCCA
BP	GO:0044265	cellular macromolecule catabolic process	IEP	HCCA
BP	GO:0044270	cellular nitrogen compound catabolic process	IEP	HCCA
BP	GO:0045893	positive regulation of DNA-templated transcription	IEP	HCCA
BP	GO:0045927	positive regulation of growth	IEP	HCCA
BP	GO:0045935	positive regulation of nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0045995	regulation of embryonic development	IEP	HCCA
BP	GO:0046483	heterocycle metabolic process	IEP	HCCA
BP	GO:0046700	heterocycle catabolic process	IEP	HCCA
BP	GO:0048316	seed development	IEP	HCCA
BP	GO:0048440	carpel development	IEP	HCCA
BP	GO:0048518	positive regulation of biological process	IEP	HCCA
BP	GO:0048519	negative regulation of biological process	IEP	HCCA
BP	GO:0048522	positive regulation of cellular process	IEP	HCCA
BP	GO:0048523	negative regulation of cellular process	IEP	HCCA
BP	GO:0048580	regulation of post-embryonic development	IEP	HCCA
BP	GO:0048608	reproductive structure development	IEP	HCCA
BP	GO:0048825	cotyledon development	IEP	HCCA
BP	GO:0048827	phyllome development	IEP	HCCA
BP	GO:0050779	RNA destabilization	IEP	HCCA
BP	GO:0051094	positive regulation of developmental process	IEP	HCCA
BP	GO:0051130	positive regulation of cellular component organization	IEP	HCCA
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051239	regulation of multicellular organismal process	IEP	HCCA
BP	GO:0051240	positive regulation of multicellular organismal process	IEP	HCCA
BP	GO:0051248	negative regulation of protein metabolic process	IEP	HCCA
BP	GO:0051252	regulation of RNA metabolic process	IEP	HCCA
BP	GO:0051254	positive regulation of RNA metabolic process	IEP	HCCA
MF	GO:0052742	phosphatidylinositol kinase activity	IEP	HCCA
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0061013	regulation of mRNA catabolic process	IEP	HCCA
BP	GO:0061014	positive regulation of mRNA catabolic process	IEP	HCCA
BP	GO:0061157	mRNA destabilization	IEP	HCCA
BP	GO:0071310	cellular response to organic substance	IEP	HCCA
BP	GO:0071365	cellular response to auxin stimulus	IEP	HCCA
BP	GO:0071495	cellular response to endogenous stimulus	IEP	HCCA
BP	GO:0080050	regulation of seed development	IEP	HCCA
BP	GO:0080090	regulation of primary metabolic process	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
BP	GO:0090305	nucleic acid phosphodiester bond hydrolysis	IEP	HCCA
BP	GO:0097659	nucleic acid-templated transcription	IEP	HCCA
BP	GO:0098781	ncRNA transcription	IEP	HCCA
CC	GO:0099080	supramolecular complex	IEP	HCCA
BP	GO:0110154	RNA decapping	IEP	HCCA
BP	GO:0110156	methylguanosine-cap decapping	IEP	HCCA
BP	GO:1901360	organic cyclic compound metabolic process	IEP	HCCA
BP	GO:1901361	organic cyclic compound catabolic process	IEP	HCCA
BP	GO:1901419	regulation of response to alcohol	IEP	HCCA
BP	GO:1901420	negative regulation of response to alcohol	IEP	HCCA
BP	GO:1902680	positive regulation of RNA biosynthetic process	IEP	HCCA
BP	GO:1903311	regulation of mRNA metabolic process	IEP	HCCA
BP	GO:1903313	positive regulation of mRNA metabolic process	IEP	HCCA
BP	GO:1903508	positive regulation of nucleic acid-templated transcription	IEP	HCCA
BP	GO:1905957	regulation of cellular response to alcohol	IEP	HCCA
BP	GO:1905958	negative regulation of cellular response to alcohol	IEP	HCCA
MF	GO:1990837	sequence-specific double-stranded DNA binding	IEP	HCCA
BP	GO:2000026	regulation of multicellular organismal development	IEP	HCCA
BP	GO:2000034	regulation of seed maturation	IEP	HCCA
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEP	HCCA
BP	GO:2000113	negative regulation of cellular macromolecule biosynthetic process	IEP	HCCA
BP	GO:2000232	regulation of rRNA processing	IEP	HCCA
BP	GO:2000234	positive regulation of rRNA processing	IEP	HCCA
BP	GO:2000241	regulation of reproductive process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR029347	Raptor_N	104	255

External Links

No external refs found!

AT3G08850 (RAPTOR1, ATRAPTOR1B, RAPTOR1B)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation