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  5. AT3G08943

AT3G08943


Description : ARM repeat superfamily protein


Gene families : OG0001300 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001300_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G08943

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00188470 evm_27.TU.AmTr_v1... Protein translocation.nucleus.nucleocytoplasmic... 0.03 OrthoFinder output from all 47 species
Adi_g102316 No alias nucleocytoplasmic import karyopherin *(IMB1) & original... 0.03 OrthoFinder output from all 47 species
Adi_g102317 No alias nucleocytoplasmic import karyopherin *(IMB1) & original... 0.03 OrthoFinder output from all 47 species
Aop_g04439 No alias nucleocytoplasmic import karyopherin *(IMB1) & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0049.g030935 No alias nucleocytoplasmic import karyopherin *(IMB1) & original... 0.06 OrthoFinder output from all 47 species
Azfi_s0061.g034897 No alias nucleocytoplasmic import karyopherin *(IMB1) & original... 0.06 OrthoFinder output from all 47 species
Ceric.10G004800.1 Ceric.10G004800 nucleocytoplasmic import karyopherin *(IMB1) & original... 0.03 OrthoFinder output from all 47 species
Ceric.28G014800.1 Ceric.28G014800 nucleocytoplasmic import karyopherin *(IMB1) & original... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021348.90 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.02 OrthoFinder output from all 47 species
Cre01.g034000 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.09 OrthoFinder output from all 47 species
Dac_g07112 No alias nucleocytoplasmic import karyopherin *(IMB1) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g07137 No alias nucleocytoplasmic import karyopherin *(IMB1) & original... 0.02 OrthoFinder output from all 47 species
LOC_Os05g28510.4 LOC_Os05g28510 IMB1 nucleocytoplasmic import karyopherin 0.08 OrthoFinder output from all 47 species
MA_34778g0010 No alias IMB1 nucleocytoplasmic import karyopherin 0.05 OrthoFinder output from all 47 species
Mp6g11310.1 No alias IMB1 nucleocytoplasmic import karyopherin 0.03 OrthoFinder output from all 47 species
Ore_g30274 No alias nucleocytoplasmic import karyopherin *(IMB1) & original... 0.04 OrthoFinder output from all 47 species
Pir_g15801 No alias nucleocytoplasmic import karyopherin *(IMB1) & original... 0.03 OrthoFinder output from all 47 species
Pp3c11_26710V3.1 Pp3c11_26710 ARM repeat superfamily protein 0.03 OrthoFinder output from all 47 species
Ppi_g03961 No alias nucleocytoplasmic import karyopherin *(IMB1) & original... 0.02 OrthoFinder output from all 47 species
Sam_g12426 No alias nucleocytoplasmic import karyopherin *(IMB1) & original... 0.04 OrthoFinder output from all 47 species
Sam_g52654 No alias nucleocytoplasmic import karyopherin *(IMB1) & original... 0.05 OrthoFinder output from all 47 species
Smo124593 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.05 OrthoFinder output from all 47 species
Spa_g12818 No alias nucleocytoplasmic import karyopherin *(IMB1) & original... 0.05 OrthoFinder output from all 47 species
Zm00001e002934_P001 Zm00001e002934 IMB1 nucleocytoplasmic import karyopherin 0.03 OrthoFinder output from all 47 species
Zm00001e018172_P001 Zm00001e018172 IMB1 nucleocytoplasmic import karyopherin 0.06 OrthoFinder output from all 47 species
Zm00001e027224_P001 Zm00001e027224 IMB1 nucleocytoplasmic import karyopherin 0.04 OrthoFinder output from all 47 species
Zm00001e031516_P001 Zm00001e031516 IMB1 nucleocytoplasmic import karyopherin 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm ISM Interproscan
CC GO:0005829 cytosol IDA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000741 karyogamy IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004815 aspartate-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005911 cell-cell junction IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006094 gluconeogenesis IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006422 aspartyl-tRNA aminoacylation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006595 polyamine metabolic process IEP HCCA
BP GO:0006596 polyamine biosynthetic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006970 response to osmotic stress IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0006997 nucleus organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
BP GO:0008216 spermidine metabolic process IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
BP GO:0008295 spermidine biosynthetic process IEP HCCA
MF GO:0008469 histone arginine N-methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009309 amine biosynthetic process IEP HCCA
CC GO:0009506 plasmodesma IEP HCCA
BP GO:0009651 response to salt stress IEP HCCA
BP GO:0009664 plant-type cell wall organization IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
BP GO:0010038 response to metal ion IEP HCCA
BP GO:0010043 response to zinc ion IEP HCCA
BP GO:0010498 proteasomal protein catabolic process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016273 arginine N-methyltransferase activity IEP HCCA
MF GO:0016274 protein-arginine N-methyltransferase activity IEP HCCA
MF GO:0016277 obsolete [myelin basic protein]-arginine N-methyltransferase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0018195 peptidyl-arginine modification IEP HCCA
BP GO:0018216 peptidyl-arginine methylation IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0019319 hexose biosynthetic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0019919 peptidyl-arginine methylation, to asymmetrical-dimethyl arginine IEP HCCA
CC GO:0030054 cell junction IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035241 protein-arginine omega-N monomethyltransferase activity IEP HCCA
MF GO:0035242 protein-arginine omega-N asymmetric methyltransferase activity IEP HCCA
BP GO:0035246 peptidyl-arginine N-methylation IEP HCCA
BP GO:0035247 peptidyl-arginine omega-N-methylation IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0042401 biogenic amine biosynthetic process IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046364 monosaccharide biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
CC GO:0046658 obsolete anchored component of plasma membrane IEP HCCA
BP GO:0046686 response to cadmium ion IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0048284 organelle fusion IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
CC GO:0070161 anchoring junction IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071669 plant-type cell wall organization or biogenesis IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001494 Importin-beta_N 23 103
No external refs found!