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AT3G10330


Description : Cyclin-like family protein


Gene families : OG0001894 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001894_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G10330

Target Alias Description ECC score Gene Family Method Actions
Adi_g056062 No alias basal transcription factor *(TFIIb) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01033246001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.04 OrthoFinder output from all 47 species
Zm00001e010238_P001 Zm00001e010238 basal transcription factor (TFIIb) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation RCA Interproscan
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005737 cytoplasm IDA Interproscan
BP GO:0006355 regulation of DNA-templated transcription ISS Interproscan
BP GO:0006366 transcription by RNA polymerase II RCA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0009737 response to abscisic acid IEP HCCA
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP HCCA
CC GO:0080008 Cul4-RING E3 ubiquitin ligase complex IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097305 response to alcohol IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR013137 Znf_TFIIB 6 47
IPR013150 TFIIB_cyclin 112 176
IPR013150 TFIIB_cyclin 213 281
No external refs found!