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AT3G11090 (LBD21)


Aliases : LBD21

Description : LOB domain-containing protein 21


Gene families : OG0000114 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000114_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G11090
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
Als_g38467 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g70670 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g24713 LOB AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01016328001 LBD11 RNA biosynthesis.transcriptional activation.AS2/LOB... 0.07 OrthoFinder output from all 47 species
GSVIVT01016335001 LBD11 RNA biosynthesis.transcriptional activation.AS2/LOB... 0.04 OrthoFinder output from all 47 species
GSVIVT01025128001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.07 OrthoFinder output from all 47 species
LOC_Os01g56530.1 LBD20, LOC_Os01g56530 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
MA_10430986g0020 LBD15, ASL11 transcription factor (AS2/LOB) 0.04 OrthoFinder output from all 47 species
MA_13024g0010 LBD11 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
MA_16646g0010 LBD27, SCP transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
MA_16891g0010 LOB transcription factor (AS2/LOB) 0.04 OrthoFinder output from all 47 species
MA_61242g0010 LBD25 transcription factor (AS2/LOB) 0.04 OrthoFinder output from all 47 species
MA_6918261g0010 LBD29, ASL16 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Nbi_g00674 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g37465 LBD11 AS2/LOB-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g27211 AS2 AS2/LOB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c4_9600V3.1 LBD20, Pp3c4_9600 LOB domain-containing protein 20 0.02 OrthoFinder output from all 47 species
Ppi_g26093 LBD25 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g49995 No alias AS2/LOB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Solyc02g069440.3.1 LBD4, Solyc02g069440 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Solyc12g010810.1.1 LBD2, Solyc12g010810 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Zm00001e000390_P001 LBD29, ASL16,... transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Zm00001e000391_P001 LBD29, ASL16,... transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Zm00001e042347_P001 LBD29, ASL16,... transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Zm00001e042443_P001 LBD29, ASL16,... transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Zm00001e042444_P001 LBD29, ASL16,... transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Zm00001e042448_P001 LBD29, ASL16,... transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006995 cellular response to nitrogen starvation IEP HCCA
BP GO:0009267 cellular response to starvation IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009627 systemic acquired resistance IEP HCCA
BP GO:0009991 response to extracellular stimulus IEP HCCA
BP GO:0031667 response to nutrient levels IEP HCCA
BP GO:0031668 cellular response to extracellular stimulus IEP HCCA
BP GO:0031669 cellular response to nutrient levels IEP HCCA
BP GO:0042594 response to starvation IEP HCCA
BP GO:0043562 cellular response to nitrogen levels IEP HCCA
BP GO:0071496 cellular response to external stimulus IEP HCCA
InterPro domains Description Start Stop
IPR004883 LOB 11 108
No external refs found!