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  5. AT3G12090

AT3G12090 (TET6)


Aliases : TET6

Description : tetraspanin6


Gene families : OG0000199 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000199_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G12090

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00197500 evm_27.TU.AmTr_v1... Protein TORNADO 2 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AMTR_s00019p00136590 TET8,... Tetraspanin-8 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00101p00124120 evm_27.TU.AmTr_v1... Tetraspanin-2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00108p00058320 evm_27.TU.AmTr_v1... Tetraspanin-6 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AT2G03840 TET13 tetraspanin13 0.07 OrthoFinder output from all 47 species
AT2G23810 TET8 tetraspanin8 0.04 OrthoFinder output from all 47 species
Adi_g016793 TET8 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g021321 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.02 OrthoFinder output from all 47 species
Adi_g022257 TET7 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g044338 TET8 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g104034 TET8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g15582 TET8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g01222 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.05 OrthoFinder output from all 47 species
Ala_g05923 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.02 OrthoFinder output from all 47 species
Ala_g21756 TET1, TRN2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g09835 TET8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g49368 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.03 OrthoFinder output from all 47 species
Als_g54554 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.03 OrthoFinder output from all 47 species
Als_g54573 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.03 OrthoFinder output from all 47 species
Als_g54663 TET8 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g14532 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.02 OrthoFinder output from all 47 species
Aob_g16586 TET10 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g24023 TET8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g30440 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.04 OrthoFinder output from all 47 species
Aop_g01671 TET8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g39366 TET2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene06721.t1 TET8, Aspi01Gene06721 regulatory protein *(TET8/9) of extracellular vesicle... 0.03 OrthoFinder output from all 47 species
Aspi01Gene06730.t1 TET8, Aspi01Gene06730 regulatory protein *(TET8/9) of extracellular vesicle... 0.04 OrthoFinder output from all 47 species
Aspi01Gene06731.t1 TET8, Aspi01Gene06731 regulatory protein *(TET8/9) of extracellular vesicle... 0.04 OrthoFinder output from all 47 species
Aspi01Gene11885.t1 TET8, Aspi01Gene11885 regulatory protein *(TET8/9) of extracellular vesicle... 0.04 OrthoFinder output from all 47 species
Aspi01Gene32840.t1 TET8, Aspi01Gene32840 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene49103.t1 TET8, Aspi01Gene49103 regulatory protein *(TET8/9) of extracellular vesicle... 0.06 OrthoFinder output from all 47 species
Azfi_s0037.g026071 TET8 not classified & original description: CDS=1-1584 0.03 OrthoFinder output from all 47 species
Cba_g02419 TET8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G090700.1 TET8, Ceric.01G090700 not classified & original description: pacid=50593002... 0.05 OrthoFinder output from all 47 species
Ceric.01G099800.1 TET8, Ceric.01G099800 not classified & original description: pacid=50592781... 0.03 OrthoFinder output from all 47 species
Ceric.01G100000.1 TET8, Ceric.01G100000 regulatory protein *(TET8/9) of extracellular vesicle... 0.03 OrthoFinder output from all 47 species
Ceric.01G100100.1 TET8, Ceric.01G100100 regulatory protein *(TET8/9) of extracellular vesicle... 0.04 OrthoFinder output from all 47 species
Ceric.01G100200.1 TET8, Ceric.01G100200 not classified & original description: pacid=50592558... 0.03 OrthoFinder output from all 47 species
Ceric.09G034400.1 TET8, Ceric.09G034400 regulatory protein *(TET8/9) of extracellular vesicle... 0.02 OrthoFinder output from all 47 species
Ceric.19G060900.1 TET7, Ceric.19G060900 regulatory protein *(TET8/9) of extracellular vesicle... 0.06 OrthoFinder output from all 47 species
Ceric.23G019300.1 TET2, Ceric.23G019300 not classified & original description: pacid=50610125... 0.03 OrthoFinder output from all 47 species
Ceric.24G073900.1 TET8, Ceric.24G073900 not classified & original description: pacid=50628789... 0.04 OrthoFinder output from all 47 species
Ceric.25G029800.1 TET2, Ceric.25G029800 not classified & original description: pacid=50594048... 0.03 OrthoFinder output from all 47 species
Ceric.30G027700.1 TET8, Ceric.30G027700 regulatory protein *(TET8/9) of extracellular vesicle... 0.05 OrthoFinder output from all 47 species
Ceric.36G016600.1 TET8, Ceric.36G016600 not classified & original description: pacid=50568205... 0.03 OrthoFinder output from all 47 species
Dac_g14278 TET1, TRN2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g36521 TET8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g00570 TET2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g35095 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.04 OrthoFinder output from all 47 species
Dcu_g47467 TET7 regulatory protein *(TET8/9) of extracellular vesicle... 0.04 OrthoFinder output from all 47 species
Dde_g24827 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.03 OrthoFinder output from all 47 species
Ehy_g04494 TET1, TRN2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g05447 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.02 OrthoFinder output from all 47 species
Ehy_g14453 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.03 OrthoFinder output from all 47 species
Ehy_g14703 TET7 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g23063 TET10 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01013147001 TET1, TRN2 Protein TORNADO 2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01016305001 No alias Tetraspanin-5 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
GSVIVT01023726001 TET8 Tetraspanin-8 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_25190 TET8 Tetraspanin-8 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_27470 No alias Tetraspanin-8 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os02g12750.1 TET2, LOC_Os02g12750 Tetraspanin-2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os02g49630.1 TET6, LOC_Os02g49630 Tetraspanin-8 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os05g03530.1 TET6, LOC_Os05g03530 Tetraspanin-6 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os08g16050.1 TET8, LOC_Os08g16050 Tetraspanin-7 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Len_g02136 TET8 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g24031 TET8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g34124 TET10 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_139843g0010 TET7 Tetraspanin-7 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_24323g0010 TET8 Tetraspanin-8 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_331856g0010 TET10 Tetraspanin-10 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Msp_g05019 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.03 OrthoFinder output from all 47 species
Msp_g05311 TET8 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g06754 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.03 OrthoFinder output from all 47 species
Msp_g12117 TET2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g40394 TET8 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g04146 TET1, TRN2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g09530 TET1, TRN2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g03478 TET10 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g11297 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.03 OrthoFinder output from all 47 species
Ore_g16261 TET2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g29936 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.03 OrthoFinder output from all 47 species
Ore_g32783 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.02 OrthoFinder output from all 47 species
Ore_g37303 TET8 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g06286 TET1, TRN2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g07223 TET8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g09067 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.02 OrthoFinder output from all 47 species
Pnu_g15015 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.02 OrthoFinder output from all 47 species
Pp3c21_1270V3.1 TET8, Pp3c21_1270 tetraspanin8 0.02 OrthoFinder output from all 47 species
Ppi_g15840 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.03 OrthoFinder output from all 47 species
Ppi_g19985 TET8 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g20123 TET4 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g28578 TET1, TRN2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g33000 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004047 TET2 not classified & original description: CDS=106-924 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0137.g022499 TET2 not classified & original description: CDS=1-792 0.05 OrthoFinder output from all 47 species
Sam_g06083 No alias regulatory protein *(TET8/9) of extracellular vesicle... 0.03 OrthoFinder output from all 47 species
Sam_g21629 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo231326 TET4 Tetraspanin-3 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Smo266767 TET8 Tetraspanin-8 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc03g059390.3.1 TET2, Solyc03g059390 Tetraspanin-2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc06g069320.4.1 TET8, Solyc06g069320 Tetraspanin-8 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc07g006280.3.1 TET8, Solyc07g006280 Tetraspanin-8 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc12g010570.1.1 TET8, Solyc12g010570 Tetraspanin-7 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g04269 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.03 OrthoFinder output from all 47 species
Spa_g05440 TET1, TRN2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g09332 TET2 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g10210 TET7 regulatory protein *(TET8/9) of extracellular vesicle... 0.03 OrthoFinder output from all 47 species
Spa_g13175 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.04 OrthoFinder output from all 47 species
Tin_g32943 TET8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e004417_P001 TET10, Zm00001e004417 Tetraspanin-10 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e027586_P001 TET4, Zm00001e027586 Tetraspanin-3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e028243_P001 TET6, Zm00001e028243 Tetraspanin-6 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Zm00001e029484_P001 TET6, Zm00001e029484 Tetraspanin-6 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Zm00001e037666_P002 TET8, Zm00001e037666 Tetraspanin-8 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e039133_P001 TET1, TRN2,... Protein TORNADO 2 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport RCA Interproscan
MF GO:0003674 molecular_function ND Interproscan
BP GO:0007568 aging ISS Interproscan
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Type GO Term Name Evidence Source
MF GO:0000217 DNA secondary structure binding IEP HCCA
MF GO:0003680 minor groove of adenine-thymine-rich DNA binding IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
CC GO:0005618 cell wall IEP HCCA
CC GO:0005654 nucleoplasm IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005911 cell-cell junction IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0006826 iron ion transport IEP HCCA
BP GO:0007154 cell communication IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009267 cellular response to starvation IEP HCCA
CC GO:0009506 plasmodesma IEP HCCA
BP GO:0009611 response to wounding IEP HCCA
BP GO:0009698 phenylpropanoid metabolic process IEP HCCA
BP GO:0009699 phenylpropanoid biosynthetic process IEP HCCA
BP GO:0009741 response to brassinosteroid IEP HCCA
BP GO:0009804 coumarin metabolic process IEP HCCA
BP GO:0009805 coumarin biosynthetic process IEP HCCA
BP GO:0009806 lignan metabolic process IEP HCCA
BP GO:0009807 lignan biosynthetic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0009891 positive regulation of biosynthetic process IEP HCCA
BP GO:0009893 positive regulation of metabolic process IEP HCCA
BP GO:0009963 positive regulation of flavonoid biosynthetic process IEP HCCA
BP GO:0009991 response to extracellular stimulus IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
BP GO:0010106 cellular response to iron ion starvation IEP HCCA
BP GO:0010167 response to nitrate IEP HCCA
BP GO:0010260 obsolete animal organ senescence IEP HCCA
MF GO:0010283 pinoresinol reductase activity IEP HCCA
BP GO:0010359 regulation of anion channel activity IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010817 regulation of hormone levels IEP HCCA
BP GO:0014070 response to organic cyclic compound IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0015706 nitrate transmembrane transport IEP HCCA
BP GO:0016128 phytosteroid metabolic process IEP HCCA
BP GO:0016129 phytosteroid biosynthetic process IEP HCCA
BP GO:0016131 brassinosteroid metabolic process IEP HCCA
BP GO:0016132 brassinosteroid biosynthetic process IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019748 secondary metabolic process IEP HCCA
BP GO:0022898 regulation of transmembrane transporter activity IEP HCCA
CC GO:0030054 cell junction IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0031667 response to nutrient levels IEP HCCA
BP GO:0031668 cellular response to extracellular stimulus IEP HCCA
BP GO:0031669 cellular response to nutrient levels IEP HCCA
BP GO:0032409 regulation of transporter activity IEP HCCA
BP GO:0032412 regulation of monoatomic ion transmembrane transporter activity IEP HCCA
BP GO:0032879 regulation of localization IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034762 regulation of transmembrane transport IEP HCCA
BP GO:0034765 regulation of monoatomic ion transmembrane transport IEP HCCA
BP GO:0040034 regulation of development, heterochronic IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0042445 hormone metabolic process IEP HCCA
BP GO:0042594 response to starvation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043269 regulation of monoatomic ion transport IEP HCCA
BP GO:0044070 regulation of monoatomic anion transport IEP HCCA
BP GO:0044550 secondary metabolite biosynthetic process IEP HCCA
CC GO:0046658 obsolete anchored component of plasma membrane IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0048440 carpel development IEP HCCA
BP GO:0048506 regulation of timing of meristematic phase transition IEP HCCA
BP GO:0048509 regulation of meristem development IEP HCCA
BP GO:0048510 regulation of timing of transition from vegetative to reproductive phase IEP HCCA
BP GO:0048653 anther development IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051049 regulation of transport IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
CC GO:0070161 anchoring junction IEP HCCA
BP GO:0071496 cellular response to external stimulus IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098661 inorganic anion transmembrane transport IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
BP GO:1901698 response to nitrogen compound IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA
BP GO:1902025 nitrate import IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:1903959 regulation of monoatomic anion transmembrane transport IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR018499 Tetraspanin/Peripherin 6 239
No external refs found!