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  5. AT3G12340

AT3G12340


Description : FKBP-like peptidyl-prolyl cis-trans isomerase family protein


Gene families : OG0000169 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000169_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G12340

Target Alias Description ECC score Gene Family Method Actions
Adi_g113483 ATFKBP53, FKBP53 peptidyl-prolyl cis-trans isomerase *(FKBP43/53) &... 0.02 OrthoFinder output from all 47 species
Aop_g63735 ATFKBP53, FKBP53 peptidyl-prolyl cis-trans isomerase *(FKBP43/53) &... 0.03 OrthoFinder output from all 47 species
Ceric.14G052500.1 ATFKBP53,... peptidyl-prolyl cis-trans isomerase *(FKBP43/53) &... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000113.23 No alias No description available 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000792.18 FKBP62, ROF1, ATFKBP62 Protein modification.protein folding and quality... 0.01 OrthoFinder output from all 47 species
Cre14.g616100 ATFKBP53, FKBP53 Protein modification.protein folding and quality... 0.03 OrthoFinder output from all 47 species
Ehy_g15501 ATFKBP53, FKBP53 peptidyl-prolyl cis-trans isomerase *(FKBP43/53) &... 0.04 OrthoFinder output from all 47 species
Mp5g18010.1 ATFKBP53, FKBP53 protein folding catalyst (FKBP) 0.08 OrthoFinder output from all 47 species
Msp_g24342 ATFKBP53, FKBP53 peptidyl-prolyl cis-trans isomerase *(FKBP43/53) &... 0.02 OrthoFinder output from all 47 species
Pir_g04203 ATFKBP53, FKBP53 peptidyl-prolyl cis-trans isomerase *(FKBP43/53) &... 0.04 OrthoFinder output from all 47 species
Sam_g15925 No alias peptidyl-prolyl cis-trans isomerase *(FKBP43/53) &... 0.03 OrthoFinder output from all 47 species
Sam_g37835 No alias peptidyl-prolyl cis-trans isomerase *(FKBP43/53) &... 0.03 OrthoFinder output from all 47 species
Solyc03g007170.3.1 ATFKBP53,... protein folding catalyst (FKBP) 0.05 OrthoFinder output from all 47 species
Spa_g24904 ATFKBP53, FKBP53 peptidyl-prolyl cis-trans isomerase *(FKBP43/53) &... 0.04 OrthoFinder output from all 47 species
Zm00001e033723_P005 ATFKBP53,... protein folding catalyst (FKBP) 0.02 OrthoFinder output from all 47 species
Zm00001e040959_P001 ATFKBP53,... protein folding catalyst (FKBP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IBA Interproscan
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity ISS Interproscan
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IBA Interproscan
MF GO:0005528 FK506 binding ISS Interproscan
MF GO:0005528 FK506 binding IBA Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006312 mitotic recombination RCA Interproscan
CC GO:0009543 chloroplast thylakoid lumen ISS Interproscan
BP GO:0009560 embryo sac egg cell differentiation RCA Interproscan
CC GO:0016020 membrane IBA Interproscan
BP GO:0018208 peptidyl-proline modification IBA Interproscan
BP GO:0042991 obsolete transcription factor import into nucleus RCA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
CC GO:0005829 cytosol IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006220 pyrimidine nucleotide metabolic process IEP HCCA
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP HCCA
BP GO:0006405 RNA export from nucleus IEP HCCA
BP GO:0006406 mRNA export from nucleus IEP HCCA
BP GO:0006606 protein import into nucleus IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009218 pyrimidine ribonucleotide metabolic process IEP HCCA
BP GO:0009220 pyrimidine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
BP GO:0009410 response to xenobiotic stimulus IEP HCCA
BP GO:0009639 response to red or far red light IEP HCCA
BP GO:0009640 photomorphogenesis IEP HCCA
BP GO:0009791 post-embryonic development IEP HCCA
BP GO:0009933 meristem structural organization IEP HCCA
BP GO:0010074 maintenance of meristem identity IEP HCCA
BP GO:0010219 regulation of vernalization response IEP HCCA
BP GO:0010220 positive regulation of vernalization response IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016093 polyprenol metabolic process IEP HCCA
BP GO:0016094 polyprenol biosynthetic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019348 dolichol metabolic process IEP HCCA
BP GO:0019408 dolichol biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0019827 stem cell population maintenance IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034504 protein localization to nucleus IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0043687 post-translational protein modification IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048584 positive regulation of response to stimulus IEP HCCA
BP GO:0050657 nucleic acid transport IEP HCCA
BP GO:0050658 RNA transport IEP HCCA
BP GO:0050826 response to freezing IEP HCCA
BP GO:0051028 mRNA transport IEP HCCA
BP GO:0051168 nuclear export IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051170 import into nucleus IEP HCCA
BP GO:0051236 establishment of RNA localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0072527 pyrimidine-containing compound metabolic process IEP HCCA
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0080157 regulation of plant-type cell wall organization or biogenesis IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:0098727 maintenance of cell number IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1903338 regulation of cell wall organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR001179 PPIase_FKBP_dom 406 494
No external refs found!