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  5. AT3G13220

AT3G13220 (ABCG26, WBC27)


Aliases : ABCG26, WBC27

Description : ABC-2 type transporter family protein


Gene families : OG0000438 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000438_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G13220
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00214480 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
AMTR_s00061p00187570 ABCG26, WBC27,... Solute transport.primary active transport.ABC... 0.13 OrthoFinder output from all 47 species
AT1G31770 ABCG14 ATP-binding cassette 14 0.04 OrthoFinder output from all 47 species
Adi_g018185 ABCG26, WBC27 sporopollenin precursor exporter *(ABCG26) & original... 0.02 OrthoFinder output from all 47 species
Aop_g21658 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene00019.t1 Aspi01Gene00019 subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene01671.t1 Aspi01Gene01671 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene10921.t1 Aspi01Gene10921 subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene10922.t1 Aspi01Gene10922 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06567 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.13G057300.1 ABCG26, WBC27,... subfamily ABCG transporter & original description:... 0.08 OrthoFinder output from all 47 species
Ceric.17G037500.1 Ceric.17G037500 subfamily ABCG transporter & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.34G074000.1 Ceric.34G074000 not classified & original description: pacid=50622980... 0.03 OrthoFinder output from all 47 species
Dac_g11548 No alias subfamily ABCG transporter & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g12680 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g19285 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g34069 ABCG26, WBC27 subfamily ABCG transporter & original description: none 0.09 OrthoFinder output from all 47 species
Dde_g21850 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g47725 ABCG26, WBC27 subfamily ABCG transporter & original description: none 0.14 OrthoFinder output from all 47 species
GSVIVT01001660001 No alias Solute transport.primary active transport.ABC... 0.09 OrthoFinder output from all 47 species
GSVIVT01014402001 No alias Solute transport.primary active transport.ABC... 0.07 OrthoFinder output from all 47 species
GSVIVT01014733001 ABCG26, WBC27 Solute transport.primary active transport.ABC... 0.12 OrthoFinder output from all 47 species
Gb_00289 ABCG26, WBC27 sporopollenin precursor exporter. subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
LOC_Os06g40550.1 ABCG26, WBC27,... sporopollenin precursor exporter. subfamily ABCG transporter 0.14 OrthoFinder output from all 47 species
LOC_Os11g07600.1 ABCG25,... subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Len_g07347 ABCG26, WBC27 subfamily ABCG transporter & original description: none 0.08 OrthoFinder output from all 47 species
Len_g13042 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g30819 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g39753 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_16472g0010 ABCG26, WBC27 ABC transporter G family member 26 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_16472g0020 ABCG26, WBC27 ABC transporter G family member 26 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_4863g0010 ABCG26, WBC27 sporopollenin precursor exporter. subfamily ABCG transporter 0.01 OrthoFinder output from all 47 species
MA_81274g0010 ABCG14 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Mp6g05900.1 ABCG14 subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Msp_g13259 ABCG26, WBC27 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g01338 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g10128 ABCG26, WBC27 subfamily ABCG transporter & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g44059 ABCG26, WBC27 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Pir_g15519 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g16739 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g24756 ABCG26, WBC27 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03189 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03210 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13835 ABCG26, WBC27 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g57469 ABCG26, WBC27 subfamily ABCG transporter & original description: none 0.09 OrthoFinder output from all 47 species
Sacu_v1.1_s0062.g015589 No alias not classified & original description: CDS=22-1557 0.03 OrthoFinder output from all 47 species
Sam_g30197 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g30198 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc07g065770.3.1 ABCG26, WBC27,... ABC transporter G family member 26 OS=Arabidopsis... 0.2 OrthoFinder output from all 47 species
Solyc07g065780.2.1 ABCG26, WBC27,... ABC transporter G family member 26 OS=Arabidopsis... 0.19 OrthoFinder output from all 47 species
Solyc12g013630.1.1 Solyc12g013630 subfamily ABCG transporter 0.15 OrthoFinder output from all 47 species
Spa_g05719 ABCG26, WBC27 subfamily ABCG transporter & original description: none 0.11 OrthoFinder output from all 47 species
Spa_g18374 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26315 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g12945 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e037432_P001 ABCG26, WBC27,... sporopollenin precursor exporter. subfamily ABCG transporter 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
BP GO:0009555 pollen development IMP Interproscan
BP GO:0010152 pollen maturation IMP Interproscan
BP GO:0010584 pollen exine formation IMP Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001676 long-chain fatty acid metabolic process IEP HCCA
BP GO:0003006 developmental process involved in reproduction IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004467 long-chain fatty acid-CoA ligase activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0005244 voltage-gated monoatomic ion channel activity IEP HCCA
MF GO:0005249 voltage-gated potassium channel activity IEP HCCA
MF GO:0005261 monoatomic cation channel activity IEP HCCA
MF GO:0005267 potassium channel activity IEP HCCA
MF GO:0005372 water transmembrane transporter activity IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009556 microsporogenesis IEP HCCA
BP GO:0009698 phenylpropanoid metabolic process IEP HCCA
BP GO:0009699 phenylpropanoid biosynthetic process IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0015250 water channel activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015271 outward rectifier potassium channel activity IEP HCCA
MF GO:0015645 fatty acid ligase activity IEP HCCA
MF GO:0016207 4-coumarate-CoA ligase activity IEP HCCA
MF GO:0016405 CoA-ligase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP HCCA
MF GO:0016713 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP HCCA
MF GO:0016878 acid-thiol ligase activity IEP HCCA
MF GO:0018685 alkane 1-monooxygenase activity IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
MF GO:0019825 oxygen binding IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022832 voltage-gated channel activity IEP HCCA
MF GO:0022843 voltage-gated monoatomic cation channel activity IEP HCCA
BP GO:0030638 polyketide metabolic process IEP HCCA
BP GO:0030639 polyketide biosynthetic process IEP HCCA
MF GO:0031956 medium-chain fatty acid-CoA ligase activity IEP HCCA
BP GO:0033866 nucleoside bisphosphate biosynthetic process IEP HCCA
BP GO:0034030 ribonucleoside bisphosphate biosynthetic process IEP HCCA
BP GO:0034033 purine nucleoside bisphosphate biosynthetic process IEP HCCA
BP GO:0034293 sexual sporulation IEP HCCA
BP GO:0035337 fatty-acyl-CoA metabolic process IEP HCCA
BP GO:0035384 thioester biosynthetic process IEP HCCA
BP GO:0035445 borate transmembrane transport IEP HCCA
BP GO:0043934 sporulation IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044550 secondary metabolite biosynthetic process IEP HCCA
BP GO:0046713 borate transport IEP HCCA
MF GO:0046715 active borate transmembrane transporter activity IEP HCCA
BP GO:0046949 fatty-acyl-CoA biosynthetic process IEP HCCA
BP GO:0048236 plant-type sporogenesis IEP HCCA
BP GO:0048608 reproductive structure development IEP HCCA
BP GO:0048658 anther wall tapetum development IEP HCCA
BP GO:0051321 meiotic cell cycle IEP HCCA
BP GO:0051791 medium-chain fatty acid metabolic process IEP HCCA
BP GO:0051792 medium-chain fatty acid biosynthetic process IEP HCCA
BP GO:0071616 acyl-CoA biosynthetic process IEP HCCA
BP GO:0080110 sporopollenin biosynthetic process IEP HCCA
MF GO:0090439 tetraketide alpha-pyrone synthase activity IEP HCCA
BP GO:1901568 fatty acid derivative metabolic process IEP HCCA
BP GO:1901570 fatty acid derivative biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 107 257
IPR013525 ABC_2_trans 415 623
No external refs found!