AT3G13410


Description : unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G55546.1); Has 49 Blast hits to 49 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).


Gene families : OG0004155 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004155_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G13410

Target Alias Description ECC score Gene Family Method Actions
Adi_g054917 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g076468 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g00801 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g09682 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0005.g009420 No alias not classified & original description: CDS=157-1089 0.03 OrthoFinder output from all 47 species
Ceric.39G037600.1 Ceric.39G037600 not classified & original description: pacid=50582674... 0.05 OrthoFinder output from all 47 species
Cre09.g392616 No alias No description available 0.02 OrthoFinder output from all 47 species
Dac_g09925 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01025511001 No alias No description available 0.05 OrthoFinder output from all 47 species
LOC_Os11g03380.1 LOC_Os11g03380 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os12g03060.1 LOC_Os12g03060 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
Len_g08510 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp1g20990.1 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Msp_g24728 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g00757 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g09606 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g15148 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g15149 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo228107 No alias No description available 0.04 OrthoFinder output from all 47 species
Solyc01g049890.3.1 Solyc01g049890 no hits & (original description: none) 0.15 OrthoFinder output from all 47 species
Spa_g12789 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Tin_g10431 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g19583 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e009233_P001 Zm00001e009233 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Zm00001e024029_P001 Zm00001e024029 no hits & (original description: none) 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000902 cell morphogenesis RCA Interproscan
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005783 endoplasmic reticulum IDA Interproscan
BP GO:0006816 calcium ion transport RCA Interproscan
BP GO:0007030 Golgi organization RCA Interproscan
BP GO:0007033 vacuole organization RCA Interproscan
BP GO:0008150 biological_process ND Interproscan
BP GO:0009651 response to salt stress RCA Interproscan
BP GO:0016049 cell growth RCA Interproscan
BP GO:0048193 Golgi vesicle transport RCA Interproscan
Type GO Term Name Evidence Source
BP GO:0000038 very long-chain fatty acid metabolic process IEP HCCA
MF GO:0000248 C-5 sterol desaturase activity IEP HCCA
CC GO:0000325 plant-type vacuole IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0004089 carbonate dehydratase activity IEP HCCA
MF GO:0004615 phosphomannomutase activity IEP HCCA
CC GO:0005753 mitochondrial proton-transporting ATP synthase complex IEP HCCA
CC GO:0005773 vacuole IEP HCCA
CC GO:0005774 vacuolar membrane IEP HCCA
CC GO:0005794 Golgi apparatus IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006007 glucose catabolic process IEP HCCA
BP GO:0006013 mannose metabolic process IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006084 acetyl-CoA metabolic process IEP HCCA
BP GO:0006089 lactate metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006301 postreplication repair IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006623 protein targeting to vacuole IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006637 acyl-CoA metabolic process IEP HCCA
BP GO:0006638 neutral lipid metabolic process IEP HCCA
BP GO:0006639 acylglycerol metabolic process IEP HCCA
BP GO:0006641 triglyceride metabolic process IEP HCCA
BP GO:0006651 diacylglycerol biosynthetic process IEP HCCA
BP GO:0006655 phosphatidylglycerol biosynthetic process IEP HCCA
BP GO:0006722 triterpenoid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006833 water transport IEP HCCA
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP HCCA
BP GO:0006972 hyperosmotic response IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0008064 regulation of actin polymerization or depolymerization IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009266 response to temperature stimulus IEP HCCA
BP GO:0009409 response to cold IEP HCCA
BP GO:0009438 methylglyoxal metabolic process IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
CC GO:0009705 plant-type vacuole membrane IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
BP GO:0010038 response to metal ion IEP HCCA
BP GO:0010639 negative regulation of organelle organization IEP HCCA
BP GO:0015976 carbon utilization IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
BP GO:0016104 triterpenoid biosynthetic process IEP HCCA
BP GO:0016129 phytosteroid biosynthetic process IEP HCCA
BP GO:0016132 brassinosteroid biosynthetic process IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
CC GO:0016469 proton-transporting two-sector ATPase complex IEP HCCA
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP HCCA
BP GO:0019243 methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione IEP HCCA
BP GO:0019307 mannose biosynthetic process IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0019320 hexose catabolic process IEP HCCA
BP GO:0019432 triglyceride biosynthetic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0019742 pentacyclic triterpenoid metabolic process IEP HCCA
BP GO:0019745 pentacyclic triterpenoid biosynthetic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0019852 L-ascorbic acid metabolic process IEP HCCA
BP GO:0019853 L-ascorbic acid biosynthetic process IEP HCCA
BP GO:0019932 second-messenger-mediated signaling IEP HCCA
BP GO:0030832 regulation of actin filament length IEP HCCA
BP GO:0030833 regulation of actin filament polymerization IEP HCCA
BP GO:0030834 regulation of actin filament depolymerization IEP HCCA
BP GO:0030835 negative regulation of actin filament depolymerization IEP HCCA
BP GO:0030837 negative regulation of actin filament polymerization IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0031333 negative regulation of protein-containing complex assembly IEP HCCA
BP GO:0032271 regulation of protein polymerization IEP HCCA
BP GO:0032272 negative regulation of protein polymerization IEP HCCA
BP GO:0032535 regulation of cellular component size IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0032956 regulation of actin cytoskeleton organization IEP HCCA
BP GO:0032970 regulation of actin filament-based process IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0035383 thioester metabolic process IEP HCCA
BP GO:0042044 fluid transport IEP HCCA
BP GO:0042182 ketone catabolic process IEP HCCA
BP GO:0042335 cuticle development IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP HCCA
BP GO:0043242 negative regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043244 regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043254 regulation of protein-containing complex assembly IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044087 regulation of cellular component biogenesis IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
CC GO:0045259 proton-transporting ATP synthase complex IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046185 aldehyde catabolic process IEP HCCA
BP GO:0046339 diacylglycerol metabolic process IEP HCCA
BP GO:0046365 monosaccharide catabolic process IEP HCCA
BP GO:0046460 neutral lipid biosynthetic process IEP HCCA
BP GO:0046463 acylglycerol biosynthetic process IEP HCCA
BP GO:0046471 phosphatidylglycerol metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046686 response to cadmium ion IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP HCCA
BP GO:0048589 developmental growth IEP HCCA
MF GO:0051015 actin filament binding IEP HCCA
BP GO:0051017 actin filament bundle assembly IEP HCCA
BP GO:0051129 negative regulation of cellular component organization IEP HCCA
BP GO:0051493 regulation of cytoskeleton organization IEP HCCA
BP GO:0051494 negative regulation of cytoskeleton organization IEP HCCA
BP GO:0051596 methylglyoxal catabolic process IEP HCCA
BP GO:0051693 actin filament capping IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0060560 developmental growth involved in morphogenesis IEP HCCA
BP GO:0061572 actin filament bundle organization IEP HCCA
BP GO:0061727 methylglyoxal catabolic process to lactate IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
MF GO:0070704 sterol desaturase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072665 protein localization to vacuole IEP HCCA
BP GO:0072666 establishment of protein localization to vacuole IEP HCCA
BP GO:0090066 regulation of anatomical structure size IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
BP GO:0110053 regulation of actin filament organization IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901334 lactone metabolic process IEP HCCA
BP GO:1901336 lactone biosynthetic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901879 regulation of protein depolymerization IEP HCCA
BP GO:1901880 negative regulation of protein depolymerization IEP HCCA
BP GO:1902903 regulation of supramolecular fiber organization IEP HCCA
BP GO:1902904 negative regulation of supramolecular fiber organization IEP HCCA
CC GO:1904949 ATPase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!