Description : RING/U-box superfamily protein
Gene families : OG0000374 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000374_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g104727 | No alias | RING-H2-class CTL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g07953 | No alias | regulatory E3 ubiquitin ligase (MREL/JUL) of microtubule... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g14290 | No alias | RING-H2-class CTL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g19927 | No alias | RING-H2-class CTL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0079.g038411 | No alias | not classified & original description: CDS=856-2112 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0154.g053541 | No alias | RING-H2-class CTL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g08299 | No alias | RING-H2-class CTL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g29893 | No alias | RING-H2-class CTL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g29258 | No alias | RING-H2-class CTL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g09761 | No alias | RING-H2-class CTL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g12352 | No alias | RING-H2-class CTL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g18552 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc12g040360.2.1 | Solyc12g040360 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g08582 | No alias | RING-H2-class CTL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005737 | cytoplasm | ISM | Interproscan |
| MF | GO:0008270 | zinc ion binding | ISS | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0010035 | response to inorganic substance | IEP | HCCA |
| BP | GO:0010167 | response to nitrate | IEP | HCCA |
| BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
| BP | GO:0048193 | Golgi vesicle transport | IEP | HCCA |
| BP | GO:1901698 | response to nitrogen compound | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 426 | 469 |
| No external refs found! |
