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  5. AT3G17690

AT3G17690 (CNGC19, ATCNGC19)


Aliases : CNGC19, ATCNGC19

Description : cyclic nucleotide gated channel 19


Gene families : OG0000170 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000170_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G17690

Target Alias Description ECC score Gene Family Method Actions
AT1G15990 CNGC7, ATCNGC7 cyclic nucleotide gated channel 7 0.02 OrthoFinder output from all 47 species
AT2G28260 CNGC15, ATCNGC15 cyclic nucleotide-gated channel 15 0.05 OrthoFinder output from all 47 species
AT3G17700 ATCNGC20, CNGC20, CNBT1 cyclic nucleotide-binding transporter 1 0.03 OrthoFinder output from all 47 species
AT4G01010 ATCNGC13, CNGC13 cyclic nucleotide-gated channel 13 0.04 OrthoFinder output from all 47 species
Ala_g24844 ATCNGC20, CNGC20, CNBT1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08048 ATCNGC20, CNGC20, CNBT1 cyclic nucleotide-gated cation channel *(CNGC) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene71929.t1 DND1, ATCNGC2,... temperature sensor protein *(CNGC2) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g13367 CNGC15, ATCNGC15 cyclic nucleotide-gated cation channel *(CNGC) &... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000851.5 ATCNGC9, CNGC9 Putative cyclic nucleotide-gated ion channel 8... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021319.15 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g05216 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g26407 DND1, ATCNGC2, CNGC2 temperature sensor protein *(CNGC2) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g06641 CNGC15, ATCNGC15 cyclic nucleotide-gated cation channel *(CNGC) &... 0.02 OrthoFinder output from all 47 species
Ehy_g04975 CNGC5, ATCNGC5 cyclic nucleotide-gated cation channel *(CNGC) &... 0.02 OrthoFinder output from all 47 species
MA_11172g0010 CNGC15, ATCNGC15 cyclic nucleotide-gated cation channel (CNGC) 0.04 OrthoFinder output from all 47 species
Ore_g09435 ATCNGC20, CNGC20, CNBT1 cyclic nucleotide-gated cation channel *(CNGC) &... 0.02 OrthoFinder output from all 47 species
Pir_g25266 ATCNGC1, CNGC1 cyclic nucleotide-gated cation channel *(CNGC) &... 0.05 OrthoFinder output from all 47 species
Pir_g51567 CNGC19, ATCNGC19 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06447 CNGC7, ATCNGC7 cyclic nucleotide-gated cation channel *(CNGC) &... 0.02 OrthoFinder output from all 47 species
Sam_g11868 No alias cyclic nucleotide-gated cation channel *(CNGC) &... 0.04 OrthoFinder output from all 47 species
Sam_g50440 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo266723 ATCNGC20, CNGC20, CNBT1 Solute transport.channels.VIC superfamily.cyclic... 0.02 OrthoFinder output from all 47 species
Smo89324 ATCNGC20, CNGC20, CNBT1 Solute transport.channels.VIC superfamily.cyclic... 0.03 OrthoFinder output from all 47 species
Solyc05g050350.2.1 ATCNGC1, CNGC1,... cyclic nucleotide-gated cation channel (CNGC) 0.02 OrthoFinder output from all 47 species
Solyc09g007840.3.1 CNGC15,... cyclic nucleotide-gated cation channel (CNGC) 0.04 OrthoFinder output from all 47 species
Solyc10g006800.4.1 DND2, CNGC4,... cyclic nucleotide-gated cation channel (CNGC) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity ISS Interproscan
MF GO:0005516 calmodulin binding ISS Interproscan
CC GO:0009507 chloroplast ISM Interproscan
MF GO:0030551 cyclic nucleotide binding ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005544 calcium-dependent phospholipid binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009867 jasmonic acid mediated signaling pathway IEP HCCA
BP GO:0009873 ethylene-activated signaling pathway IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010185 regulation of cellular defense response IEP HCCA
BP GO:0010186 positive regulation of cellular defense response IEP HCCA
BP GO:0010941 regulation of cell death IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0031349 positive regulation of defense response IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
BP GO:0048584 positive regulation of response to stimulus IEP HCCA
BP GO:0060548 negative regulation of cell death IEP HCCA
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 172 489
No external refs found!