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  5. AT3G18260

AT3G18260


Description : Reticulon family protein


Gene families : OG0000272 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000272_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G18260

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00221140 evm_27.TU.AmTr_v1... Reticulon-like protein B9 OS=Arabidopsis thaliana 0.08 OrthoFinder output from all 47 species
Adi_g015887 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.03 OrthoFinder output from all 47 species
Ala_g01036 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.04 OrthoFinder output from all 47 species
Ala_g24666 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g25844 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Ceric.19G012300.1 Ceric.19G012300 ER-tubule curvature-inducing protein *(Reticulon) &... 0.04 OrthoFinder output from all 47 species
Dac_g03669 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Dde_g49439 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
GSVIVT01008336001 No alias Reticulon-like protein B9 OS=Arabidopsis thaliana 0.28 OrthoFinder output from all 47 species
GSVIVT01011845001 No alias Reticulon-like protein B9 OS=Arabidopsis thaliana 0.28 OrthoFinder output from all 47 species
LOC_Os01g04640.1 LOC_Os01g04640 ER-associated protein (Reticulon) 0.08 OrthoFinder output from all 47 species
LOC_Os01g49660.1 LOC_Os01g49660 ER-associated protein (Reticulon) 0.06 OrthoFinder output from all 47 species
LOC_Os05g24770.1 BTI1, RTNLB1,... ER-associated protein (Reticulon) 0.03 OrthoFinder output from all 47 species
Len_g56590 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.03 OrthoFinder output from all 47 species
Lfl_g27211 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
MA_654072g0010 No alias ER-associated protein (Reticulon) 0.09 OrthoFinder output from all 47 species
Nbi_g04608 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.03 OrthoFinder output from all 47 species
Sam_g37684 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Solyc03g119190.3.1 Solyc03g119190 ER-associated protein (Reticulon) 0.24 OrthoFinder output from all 47 species
Solyc05g008890.3.1 Solyc05g008890 ER-associated protein (Reticulon) 0.2 OrthoFinder output from all 47 species
Spa_g02967 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.05 OrthoFinder output from all 47 species
Spa_g51559 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.04 OrthoFinder output from all 47 species
Spa_g56482 RTNLB3 ER-tubule curvature-inducing protein *(Reticulon) &... 0.03 OrthoFinder output from all 47 species
Tin_g32860 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Zm00001e012762_P001 Zm00001e012762 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e028102_P001 Zm00001e028102 ER-associated protein (Reticulon) 0.07 OrthoFinder output from all 47 species
Zm00001e032328_P001 Zm00001e032328 ER-associated protein (Reticulon) 0.16 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
CC GO:0005783 endoplasmic reticulum ISS Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003388 Reticulon 39 194
No external refs found!