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AT3G19240


Description : Vacuolar import/degradation, Vid27-related protein


Gene families : OG0002427 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002427_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G19240

Target Alias Description ECC score Gene Family Method Actions
Aev_g03974 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g34580 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g23238 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_11198 No alias Protein CYPRO4 OS=Cynara cardunculus... 0.03 OrthoFinder output from all 47 species
LOC_Os02g54780.1 LOC_Os02g54780 Protein CYPRO4 OS=Cynara cardunculus... 0.05 OrthoFinder output from all 47 species
Len_g24425 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g012952 No alias not classified & original description: CDS=195-2036 0.03 OrthoFinder output from all 47 species
Zm00001e023725_P001 Zm00001e023725 Protein CYPRO4 OS=Cynara cardunculus... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0006499 N-terminal protein myristoylation IDA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000103 sulfate assimilation IEP HCCA
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP HCCA
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
MF GO:0005527 macrolide binding IEP HCCA
MF GO:0005528 FK506 binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
CC GO:0005635 nuclear envelope IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006354 DNA-templated transcription elongation IEP HCCA
BP GO:0006366 transcription by RNA polymerase II IEP HCCA
BP GO:0007062 sister chromatid cohesion IEP HCCA
BP GO:0009266 response to temperature stimulus IEP HCCA
BP GO:0009314 response to radiation IEP HCCA
BP GO:0009416 response to light stimulus IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009735 response to cytokinin IEP HCCA
BP GO:0009739 response to gibberellin IEP HCCA
BP GO:0009756 carbohydrate mediated signaling IEP HCCA
BP GO:0009845 seed germination IEP HCCA
BP GO:0009880 embryonic pattern specification IEP HCCA
BP GO:0009910 negative regulation of flower development IEP HCCA
BP GO:0009933 meristem structural organization IEP HCCA
MF GO:0009973 adenylyl-sulfate reductase activity IEP HCCA
BP GO:0010014 meristem initiation IEP HCCA
BP GO:0010072 primary shoot apical meristem specification IEP HCCA
BP GO:0010162 seed dormancy process IEP HCCA
BP GO:0010182 sugar mediated signaling pathway IEP HCCA
BP GO:0010286 heat acclimation IEP HCCA
BP GO:0010431 seed maturation IEP HCCA
BP GO:0010564 regulation of cell cycle process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019915 lipid storage IEP HCCA
BP GO:0021700 developmental maturation IEP HCCA
BP GO:0022611 dormancy process IEP HCCA
MF GO:0032266 phosphatidylinositol-3-phosphate binding IEP HCCA
BP GO:0032784 regulation of DNA-templated transcription elongation IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0034243 regulation of transcription elongation by RNA polymerase II IEP HCCA
BP GO:0034605 cellular response to heat IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0042542 response to hydrogen peroxide IEP HCCA
BP GO:0045595 regulation of cell differentiation IEP HCCA
BP GO:0048366 leaf development IEP HCCA
BP GO:0048532 anatomical structure arrangement IEP HCCA
BP GO:0048581 negative regulation of post-embryonic development IEP HCCA
BP GO:0048825 cotyledon development IEP HCCA
BP GO:0050826 response to freezing IEP HCCA
BP GO:0051093 negative regulation of developmental process IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
BP GO:0051241 negative regulation of multicellular organismal process IEP HCCA
BP GO:0051301 cell division IEP HCCA
BP GO:0070370 cellular heat acclimation IEP HCCA
BP GO:0071695 anatomical structure maturation IEP HCCA
CC GO:0071944 cell periphery IEP HCCA
MF GO:0080025 phosphatidylinositol-3,5-bisphosphate binding IEP HCCA
BP GO:0090421 embryonic meristem initiation IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
MF GO:1901981 phosphatidylinositol phosphate binding IEP HCCA
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP HCCA
BP GO:2000242 negative regulation of reproductive process IEP HCCA
InterPro domains Description Start Stop
IPR013863 VID27_C 276 588
No external refs found!