AT3G22840 (ELIP, ELIP1)

Aliases : ELIP, ELIP1

Description : Chlorophyll A-B binding family protein

Gene families : OG0000684 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000684_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G22840
Cluster	HCCA: Cluster_37

Target	Alias	Description	ECC score	Gene Family Method
Aspi01Gene71952.t1	ELIP, ELIP1,...	LHC-related protein *(ELIP) & original description: none	0.01	OrthoFinder output from all 47 species
Cba_g16640	ELIP, ELIP1	LHC-related protein *(ELIP) & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.10G073100.1	ELIP, ELIP1,...	LHC-related protein *(ELIP) & original description:...	0.04	OrthoFinder output from all 47 species
Ehy_g16293	ELIP, ELIP1	LHC-related protein *(ELIP) & original description: none	0.04	OrthoFinder output from all 47 species
LOC_Os01g14410.1	ELIP, ELIP1,...	ELIP LHC-related protein	0.02	OrthoFinder output from all 47 species
LOC_Os02g16560.1	ELIP, ELIP1,...	ELIP LHC-related protein	0.01	OrthoFinder output from all 47 species
LOC_Os03g30400.1	ELIP2, LOC_Os03g30400	ELIP LHC-related protein	0.02	OrthoFinder output from all 47 species
Len_g56142	ELIP, ELIP1	LHC-related protein *(ELIP) & original description: none	0.01	OrthoFinder output from all 47 species
MA_10432488g0010	ELIP2	ELIP LHC-related protein	0.03	OrthoFinder output from all 47 species
MA_113999g0010	ELIP, ELIP1	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Mp3g12550.1	ELIP, ELIP1	ELIP LHC-related protein	0.02	OrthoFinder output from all 47 species
Mp3g12560.1	ELIP, ELIP1	ELIP LHC-related protein	0.02	OrthoFinder output from all 47 species
Mp3g15080.1	ELIP, ELIP1	ELIP LHC-related protein	0.01	OrthoFinder output from all 47 species
Mp3g15090.1	ELIP, ELIP1	ELIP LHC-related protein	0.01	OrthoFinder output from all 47 species
Mp3g15970.1	ELIP, ELIP1	ELIP LHC-related protein	0.01	OrthoFinder output from all 47 species
Mp4g18550.1	No alias	ELIP LHC-related protein	0.01	OrthoFinder output from all 47 species
Mp4g18560.1	No alias	ELIP LHC-related protein	0.01	OrthoFinder output from all 47 species
Mp4g18580.1	No alias	ELIP LHC-related protein	0.02	OrthoFinder output from all 47 species
Mp4g18610.1	No alias	ELIP LHC-related protein	0.02	OrthoFinder output from all 47 species
Mp4g18630.1	No alias	ELIP LHC-related protein	0.02	OrthoFinder output from all 47 species
Mp6g14540.1	ELIP2	ELIP LHC-related protein	0.04	OrthoFinder output from all 47 species
Mp6g20750.1	ELIP, ELIP1	ELIP LHC-related protein	0.01	OrthoFinder output from all 47 species
Mp6g20760.1	ELIP, ELIP1	ELIP LHC-related protein	0.01	OrthoFinder output from all 47 species
Mp6g20770.1	ELIP, ELIP1	ELIP LHC-related protein	0.01	OrthoFinder output from all 47 species
Smo227788	ELIP, ELIP1	Photosynthesis.photophosphorylation.photosystem...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009266	response to temperature stimulus	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009408	response to heat	None	Extended
BP	GO:0009409	response to cold	IEP	Interproscan
BP	GO:0009411	response to UV	RCA	Interproscan
BP	GO:0009416	response to light stimulus	None	Extended
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009535	chloroplast thylakoid membrane	IDA	Interproscan
CC	GO:0009536	plastid	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009637	response to blue light	None	Extended
BP	GO:0009639	response to red or far red light	None	Extended
BP	GO:0009642	response to light intensity	None	Extended
BP	GO:0009644	response to high light intensity	None	Extended
BP	GO:0009718	anthocyanin-containing compound biosynthetic process	RCA	Interproscan
BP	GO:0009743	response to carbohydrate	None	Extended
BP	GO:0009744	response to sucrose	RCA	Interproscan
BP	GO:0009812	flavonoid metabolic process	None	Extended
BP	GO:0009813	flavonoid biosynthetic process	RCA	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010029	regulation of seed germination	None	Extended
BP	GO:0010030	positive regulation of seed germination	IMP	Interproscan
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010114	response to red light	None	Extended
BP	GO:0010117	photoprotection	IMP	Interproscan
BP	GO:0010218	response to far red light	None	Extended
BP	GO:0010224	response to UV-B	RCA	Interproscan
BP	GO:0010380	regulation of chlorophyll biosynthetic process	ISS	Interproscan
CC	GO:0016020	membrane	None	Extended
MF	GO:0016168	chlorophyll binding	ISS	Interproscan
BP	GO:0019222	regulation of metabolic process	None	Extended
CC	GO:0019867	outer membrane	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0031968	organelle outer membrane	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034285	response to disaccharide	None	Extended
CC	GO:0034357	photosynthetic membrane	None	Extended
BP	GO:0034605	cellular response to heat	IEP	Interproscan
BP	GO:0034644	cellular response to UV	None	Extended
CC	GO:0042170	plastid membrane	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042440	pigment metabolic process	None	Extended
CC	GO:0042651	thylakoid membrane	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0046148	pigment biosynthetic process	None	Extended
BP	GO:0046283	anthocyanin-containing compound metabolic process	None	Extended
MF	GO:0046906	tetrapyrrole binding	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048580	regulation of post-embryonic development	None	Extended
BP	GO:0048582	positive regulation of post-embryonic development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051094	positive regulation of developmental process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051239	regulation of multicellular organismal process	None	Extended
BP	GO:0051240	positive regulation of multicellular organismal process	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
CC	GO:0055035	plastid thylakoid membrane	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070141	response to UV-A	None	Extended
BP	GO:0071214	cellular response to abiotic stimulus	None	Extended
BP	GO:0071478	cellular response to radiation	None	Extended
BP	GO:0071482	cellular response to light stimulus	None	Extended
BP	GO:0071483	cellular response to blue light	IEP	Interproscan
BP	GO:0071484	cellular response to light intensity	None	Extended
BP	GO:0071486	cellular response to high light intensity	IEP	Interproscan
BP	GO:0071489	cellular response to red or far red light	None	Extended
BP	GO:0071490	cellular response to far red light	IEP	Interproscan
BP	GO:0071491	cellular response to red light	IEP	Interproscan
BP	GO:0071492	cellular response to UV-A	IEP	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0080167	response to karrikin	IEP	Interproscan
BP	GO:0090056	regulation of chlorophyll metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0098588	bounding membrane of organelle	None	Extended
BP	GO:0104004	cellular response to environmental stimulus	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1900140	regulation of seedling development	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901401	regulation of tetrapyrrole metabolic process	None	Extended
BP	GO:1901463	regulation of tetrapyrrole biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:2000026	regulation of multicellular organismal development	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR022796	Chloroa_b-bind	96	139

External Links

No external refs found!

AT3G22840 (ELIP, ELIP1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation