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  5. Pnu_g30286

Pnu_g30286


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g30286
Cluster HCCA: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00172690 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g37170... 0.02 OrthoFinder output from all 47 species
Ala_g16619 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36487 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30489 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g30704 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07004 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g09867 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g05970 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.04G079600.1 OTP84, Ceric.04G079600 not classified & original description: pacid=50631214... 0.03 OrthoFinder output from all 47 species
Dac_g05720 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g25167 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g05745 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08846 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g14666 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g04948 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05894 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05905 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16108 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g25586 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g34076 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g50255 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g53944 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g03400 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g33667 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g10800 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g12907 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g13299 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g03334 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g49579 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g60793 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g04436 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g04526 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g04536 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g15705 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g16177 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g20310 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g22357 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g23560 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g38417 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo34484 No alias Pentatricopeptide repeat-containing protein At3g46790,... 0.03 OrthoFinder output from all 47 species
Solyc07g008890.3.1 Solyc07g008890 Pentatricopeptide repeat-containing protein At4g33170... 0.03 OrthoFinder output from all 47 species
Tin_g01122 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g04706 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06105 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g19943 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26634 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g35681 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR046849 Eplus_motif 206 233
IPR032867 DYW_dom 237 329
IPR046848 E_motif 142 201
IPR002885 Pentatricopeptide_repeat 22 69
IPR002885 Pentatricopeptide_repeat 97 120
No external refs found!