AT3G24000


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G24000

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00181560 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g25360... 0.03 OrthoFinder output from all 47 species
AMTR_s00022p00252600 MEF1 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
AT1G31010 OSB4 organellar single-stranded DNA binding protein 4 0.01 OrthoFinder output from all 47 species
AT3G28640 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.06 OrthoFinder output from all 47 species
Adi_g003776 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g004526 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g024582 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g036486 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g036802 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g056821 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g101241 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g105593 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g08067 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17648 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g21063 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g24403 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06049 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06374 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06630 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06689 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06904 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g14332 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18266 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g19247 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g20273 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g22699 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30425 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30853 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g33642 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g39735 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55111 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g19032 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g23626 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene08990.t1 OTP84, Aspi01Gene08990 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene18568.t1 Aspi01Gene18568 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene29463.t1 REME1, Aspi01Gene29463 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34036.t1 CRR22, Aspi01Gene34036 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene42015.t1 Aspi01Gene42015 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0001.g000662 No alias not classified & original description: CDS=1-2844 0.02 OrthoFinder output from all 47 species
Azfi_s0010.g012398 No alias not classified & original description: CDS=1-3681 0.01 OrthoFinder output from all 47 species
Azfi_s0022.g016150 No alias not classified & original description: CDS=1-2547 0.03 OrthoFinder output from all 47 species
Azfi_s0029.g024142 No alias not classified & original description: CDS=203-3646 0.04 OrthoFinder output from all 47 species
Azfi_s0032.g024769 OTP84 not classified & original description: CDS=1-2910 0.07 OrthoFinder output from all 47 species
Azfi_s0050.g031009 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2424 0.03 OrthoFinder output from all 47 species
Azfi_s0052.g031587 No alias not classified & original description: CDS=171-3077 0.02 OrthoFinder output from all 47 species
Azfi_s0068.g036300 EMB2758 not classified & original description: CDS=1-1932 0.02 OrthoFinder output from all 47 species
Azfi_s0074.g037385 OTP84 not classified & original description: CDS=80-2584 0.02 OrthoFinder output from all 47 species
Azfi_s0087.g042376 No alias not classified & original description: CDS=1-2979 0.02 OrthoFinder output from all 47 species
Azfi_s0092.g043152 No alias not classified & original description: CDS=1-744 0.02 OrthoFinder output from all 47 species
Azfi_s0093.g043216 CRR22 not classified & original description: CDS=139-1788 0.03 OrthoFinder output from all 47 species
Azfi_s0094.g043395 No alias not classified & original description: CDS=1-2703 0.01 OrthoFinder output from all 47 species
Azfi_s0112.g045771 No alias not classified & original description: CDS=1-2433 0.01 OrthoFinder output from all 47 species
Azfi_s0349.g066478 OTP84 not classified & original description: CDS=1-2082 0.02 OrthoFinder output from all 47 species
Azfi_s0368.g067019 No alias not classified & original description: CDS=1-2523 0.03 OrthoFinder output from all 47 species
Cba_g05301 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g05960 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g07300 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g11729 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g17193 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g35153 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.09G085300.1 Ceric.09G085300 not classified & original description: pacid=50587383... 0.03 OrthoFinder output from all 47 species
Ceric.13G082600.1 Ceric.13G082600 not classified & original description: pacid=50636923... 0.02 OrthoFinder output from all 47 species
Ceric.29G017900.1 Ceric.29G017900 not classified & original description: pacid=50624370... 0.02 OrthoFinder output from all 47 species
Dac_g19071 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g19103 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g30160 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g35889 EMB2744 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16911 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g02978 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g03922 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g04314 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g07665 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g11099 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g13082 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g16093 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16095 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g17089 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g18169 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g19440 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g22020 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g22294 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g24665 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g12147 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g16902 EMB2261 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Len_g04352 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Len_g18053 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Len_g19016 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g22097 EMB2261 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g44370 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g54965 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g39239 OTP82 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g41072 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_34492g0010 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.02 OrthoFinder output from all 47 species
MA_72886g0010 No alias Pentatricopeptide repeat-containing protein At5g50390,... 0.01 OrthoFinder output from all 47 species
Msp_g03121 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g27109 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28534 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Msp_g44674 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g03191 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05890 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g11031 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g20341 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g24069 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g24205 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g29271 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g41716 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g43650 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g02988 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g30911 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g32186 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13036 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g05179 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g07618 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g36024 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g53382 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53969 OTP84 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007241 No alias protein S-acyltransferase *(PAT22) & original... 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011560 No alias not classified & original description: CDS=661-2424 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011714 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2064 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0055.g014492 No alias not classified & original description: CDS=1-2247 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0057.g014767 OTP84 not classified & original description: CDS=399-2006 0.01 OrthoFinder output from all 47 species
Sam_g05175 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g05209 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g11635 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g13631 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g15980 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g16146 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g17279 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g17656 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g17721 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g24227 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g24755 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g25339 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27930 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g29293 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29725 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g30277 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g35116 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g35736 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g36708 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g37186 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g39170 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g40244 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g46501 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g14545 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g16753 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g44841 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g05657 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g07666 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g22744 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g24970 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR032867 DYW_dom 499 623
IPR002885 Pentatricopeptide_repeat 472 495
IPR002885 Pentatricopeptide_repeat 400 424
IPR002885 Pentatricopeptide_repeat 125 170
IPR002885 Pentatricopeptide_repeat 327 374
IPR002885 Pentatricopeptide_repeat 226 272
No external refs found!