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  5. Pnu_g30292

Pnu_g30292 (ATGID1C, GID1C)


Aliases : ATGID1C, GID1C

Description : gibberellin receptor *(GID1) & original description: none


Gene families : OG0000050 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g30292

Target Alias Description ECC score Gene Family Method Actions
AT2G45600 No alias alpha/beta-Hydrolases superfamily protein 0.05 OrthoFinder output from all 47 species
Ala_g13469 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g37533 CXE17, AtCXE17 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0159.g053927 CXE17, AtCXE17 not classified & original description: CDS=1-1131 0.05 OrthoFinder output from all 47 species
Ceric.37G015700.1 CXE17, AtCXE17,... not classified & original description: pacid=50616322... 0.02 OrthoFinder output from all 47 species
LOC_Os03g15270.1 CXE17, AtCXE17,... Probable carboxylesterase 17 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os07g34240.1 LOC_Os07g34240 2-hydroxyisoflavanone dehydratase OS=Glycyrrhiza... 0.02 OrthoFinder output from all 47 species
LOC_Os07g34280.1 LOC_Os07g34280 2-hydroxyisoflavanone dehydratase OS=Glycyrrhiza... 0.03 OrthoFinder output from all 47 species
LOC_Os09g28720.1 LOC_Os09g28720 Tuliposide A-converting enzyme 1, chloroplastic... 0.02 OrthoFinder output from all 47 species
Len_g37867 KCS10, FDH 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g59242 CXE20, AtCXE20 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_129063g0010 No alias Probable carboxylesterase 15 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_384628g0010 CXE13, ATCXE13 Tuliposide A-converting enzyme 1, chloroplastic... 0.03 OrthoFinder output from all 47 species
MA_9955818g0010 No alias Probable carboxylesterase 15 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Nbi_g25180 CXE17, AtCXE17 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30962 ATGID1C, GID1C not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g36374 ATGID1C, GID1C not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo440349 ATGID1C, GID1C Gibberellin receptor GID1C OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Spa_g21052 CXE17, AtCXE17 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23739 GID1B, ATGID1B not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004097 catechol oxidase activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004664 prephenate dehydratase activity IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006558 L-phenylalanine metabolic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0009094 L-phenylalanine biosynthetic process IEP HCCA
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP HCCA
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR013094 AB_hydrolase_3 103 320
No external refs found!