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  5. AT3G24450

AT3G24450


Description : Heavy metal transport/detoxification superfamily protein


Gene families : OG0000090 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000090_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G24450

Target Alias Description ECC score Gene Family Method Actions
AT1G06330 No alias Heavy metal transport/detoxification superfamily protein 0.04 OrthoFinder output from all 47 species
AT1G71050 HIPP20 Heavy metal transport/detoxification superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G48970 No alias Heavy metal transport/detoxification superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G56891 No alias Heavy metal transport/detoxification superfamily protein 0.04 OrthoFinder output from all 47 species
AT4G39700 No alias Heavy metal transport/detoxification superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G05365 No alias Heavy metal transport/detoxification superfamily protein 0.1 OrthoFinder output from all 47 species
Adi_g040832 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g25261 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g25263 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g25264 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g34906 CCH copper chaperone *(ATX/CCH) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g38643 HIPP20 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14499 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15054 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g36796 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g40949 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g24647 ATX1, ATATX1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04806 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g38327 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g50558 NAKR1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene08784.t1 Aspi01Gene08784 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene12053.t1 Aspi01Gene12053 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene16664.t1 Aspi01Gene16664 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene16665.t1 Aspi01Gene16665 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene19665.t1 Aspi01Gene19665 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene19666.t1 Aspi01Gene19666 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene36851.t1 Aspi01Gene36851 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene39647.t1 Aspi01Gene39647 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene50654.t1 Aspi01Gene50654 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene53126.t1 Aspi01Gene53126 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene53126.t2 Aspi01Gene53126 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene53128.t1 CCH, Aspi01Gene53128 copper chaperone *(ATX/CCH) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene65660.t1 Aspi01Gene65660 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0198.g057426 No alias not classified & original description: CDS=77-526 0.03 OrthoFinder output from all 47 species
Cba_g05568 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g05646 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g09356 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g13074 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g46375 HIPP20 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.07G003200.1 Ceric.07G003200 not classified & original description: pacid=50628015... 0.04 OrthoFinder output from all 47 species
Ceric.10G055100.1 Ceric.10G055100 not classified & original description: pacid=50611673... 0.08 OrthoFinder output from all 47 species
Ceric.24G019500.1 Ceric.24G019500 not classified & original description: pacid=50629311... 0.03 OrthoFinder output from all 47 species
Ceric.32G005700.1 Ceric.32G005700 not classified & original description: pacid=50598369... 0.05 OrthoFinder output from all 47 species
Dac_g15229 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g22666 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g10713 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g39890 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12356 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01018725001 HIPP27 Heavy metal-associated isoprenylated plant protein 27... 0.03 OrthoFinder output from all 47 species
GSVIVT01020704001 No alias Heavy metal-associated isoprenylated plant protein 28... 0.04 OrthoFinder output from all 47 species
GSVIVT01022185001 No alias Heavy metal-associated isoprenylated plant protein 23... 0.03 OrthoFinder output from all 47 species
GSVIVT01025864001 No alias Heavy metal-associated isoprenylated plant protein 45... 0.07 OrthoFinder output from all 47 species
GSVIVT01027966001 No alias Heavy metal-associated isoprenylated plant protein 36... 0.06 OrthoFinder output from all 47 species
GSVIVT01030883001 HIPP21 Heavy metal-associated isoprenylated plant protein 21... 0.06 OrthoFinder output from all 47 species
GSVIVT01034760001 No alias Nutrient uptake.copper uptake.reduction-based uptake.CCH... 0.06 OrthoFinder output from all 47 species
Gb_09038 HIPP20 Heavy metal-associated isoprenylated plant protein 20... 0.04 OrthoFinder output from all 47 species
Gb_20919 No alias Heavy metal-associated isoprenylated plant protein 23... 0.02 OrthoFinder output from all 47 species
Gb_20921 No alias Heavy metal-associated isoprenylated plant protein 23... 0.02 OrthoFinder output from all 47 species
Gb_29259 No alias Heavy metal-associated isoprenylated plant protein 37... 0.03 OrthoFinder output from all 47 species
LOC_Os03g60480.1 NAKR2, LOC_Os03g60480 Protein SODIUM POTASSIUM ROOT DEFECTIVE 2 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os05g30570.1 LOC_Os05g30570 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g16566 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g32237 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g38826 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g49161 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g17429 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g20193 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g22999 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g28924 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g39758 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10430115g0010 No alias Heavy metal-associated isoprenylated plant protein 21... 0.05 OrthoFinder output from all 47 species
MA_525649g0010 No alias Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_54284g0010 No alias Heavy metal-associated isoprenylated plant protein 23... 0.03 OrthoFinder output from all 47 species
MA_71520g0010 No alias Heavy metal-associated isoprenylated plant protein 28... 0.03 OrthoFinder output from all 47 species
Mp2g01820.1 ATX1, ATATX1 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp2g12450.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp2g26500.1 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Msp_g04564 HIPP20 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04087 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g45102 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g17167 HIPP20 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g24250 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g35065 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0035.g011436 No alias not classified & original description: CDS=202-840 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0085.g018364 No alias not classified & original description: CDS=311-727 0.03 OrthoFinder output from all 47 species
Smo409960 HIPP20 No description available 0.03 OrthoFinder output from all 47 species
Solyc01g098760.4.1 Solyc01g098760 Heavy metal-associated isoprenylated plant protein 33... 0.03 OrthoFinder output from all 47 species
Solyc01g111600.3.1 HIPP26, FP6,... Heavy metal-associated isoprenylated plant protein 26... 0.05 OrthoFinder output from all 47 species
Solyc02g076880.4.1 Solyc02g076880 Heavy metal-associated isoprenylated plant protein 28... 0.03 OrthoFinder output from all 47 species
Solyc02g091300.3.1 HIPP21, Solyc02g091300 Heavy metal-associated isoprenylated plant protein 20... 0.1 OrthoFinder output from all 47 species
Solyc04g007630.2.1 HIPP20, Solyc04g007630 Heavy metal-associated isoprenylated plant protein 20... 0.06 OrthoFinder output from all 47 species
Solyc05g051820.3.1 Solyc05g051820 Heavy metal-associated isoprenylated plant protein 23... 0.03 OrthoFinder output from all 47 species
Solyc07g055010.3.1 Solyc07g055010 Heavy metal-associated isoprenylated plant protein 28... 0.04 OrthoFinder output from all 47 species
Zm00001e000154_P001 Zm00001e000154 Heavy metal-associated isoprenylated plant protein 30... 0.03 OrthoFinder output from all 47 species
Zm00001e003565_P001 Zm00001e003565 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e015864_P001 Zm00001e015864 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e019765_P001 Zm00001e019765 Heavy metal-associated isoprenylated plant protein 28... 0.03 OrthoFinder output from all 47 species
Zm00001e029729_P001 Zm00001e029729 Heavy metal-associated isoprenylated plant protein 36... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding ISS Interproscan
BP GO:0006825 copper ion transport ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005618 cell wall IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0007389 pattern specification process IEP HCCA
BP GO:0009062 fatty acid catabolic process IEP HCCA
BP GO:0009740 gibberellic acid mediated signaling pathway IEP HCCA
BP GO:0009799 specification of symmetry IEP HCCA
BP GO:0009855 determination of bilateral symmetry IEP HCCA
BP GO:0010014 meristem initiation IEP HCCA
BP GO:0010073 meristem maintenance IEP HCCA
BP GO:0010162 seed dormancy process IEP HCCA
BP GO:0010476 gibberellin mediated signaling pathway IEP HCCA
BP GO:0015994 chlorophyll metabolic process IEP HCCA
BP GO:0015995 chlorophyll biosynthetic process IEP HCCA
BP GO:0016042 lipid catabolic process IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
BP GO:0022611 dormancy process IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
BP GO:0044242 cellular lipid catabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046148 pigment biosynthetic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
BP GO:0048513 animal organ development IEP HCCA
BP GO:0048609 multicellular organismal reproductive process IEP HCCA
BP GO:0072329 monocarboxylic acid catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006121 HMA_dom 79 128
No external refs found!