AT3G24600


Description : Late embryogenesis abundant protein, group 2


Gene families : OG0001442 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001442_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G24600

Target Alias Description ECC score Gene Family Method Actions
AT5G42860 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.03 OrthoFinder output from all 47 species
Adi_g007986 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g07747 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g12307 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.04G091500.1 Ceric.04G091500 not classified & original description: pacid=50630876... 0.03 OrthoFinder output from all 47 species
Dcu_g25242 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_00802 No alias microtubule-interacting component CC of cellulose... 0.03 OrthoFinder output from all 47 species
LOC_Os04g59330.1 LOC_Os04g59330 microtubule-interacting component CC of cellulose... 0.04 OrthoFinder output from all 47 species
MA_8816169g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Pir_g36417 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g08763 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g25484 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e000854_P001 Zm00001e000854 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e007480_P002 Zm00001e007480 microtubule-interacting component CC of cellulose... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
MF GO:0004396 hexokinase activity IEP HCCA
MF GO:0005337 nucleoside transmembrane transporter activity IEP HCCA
MF GO:0005372 water transmembrane transporter activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005795 Golgi stack IEP HCCA
BP GO:0009894 regulation of catabolic process IEP HCCA
MF GO:0015250 water channel activity IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
MF GO:0019200 carbohydrate kinase activity IEP HCCA
BP GO:0031329 regulation of cellular catabolic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0060211 regulation of nuclear-transcribed mRNA poly(A) tail shortening IEP HCCA
BP GO:0061013 regulation of mRNA catabolic process IEP HCCA
BP GO:1903311 regulation of mRNA metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!