Pnu_g30303 (PGP11)

Aliases : PGP11

Description : subfamily ABCB transporter & original description: none

Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pnu_g30303

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00049p00128390	PGP16,...	ABC transporter B family member 16 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
Ala_g18028	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g26174	No alias	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g50177	ATTAP1, TAP1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g68729	PGP11	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene08453.t1	PGP11, Aspi01Gene08453	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene46501.t1	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.34G053700.1	PGP2, Ceric.34G053700	subfamily ABCB transporter & original description:...	0.02	OrthoFinder output from all 47 species
Dac_g35671	ABCB19,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g41330	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g03201	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01013125001	PGP2	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
GSVIVT01017696001	PGP11	Solute transport.primary active transport.ABC...	0.04	OrthoFinder output from all 47 species
Gb_10211	No alias	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Gb_27774	ALS1, ATTAP2, TAP2	ABC transporter B family member 25 OS=Oryza sativa...	0.03	OrthoFinder output from all 47 species
Gb_32125	PGP11	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Gb_33057	ABCB19,...	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Gb_33058	ABCB19,...	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Gb_36497	No alias	subfamily ABCB transporter	0.04	OrthoFinder output from all 47 species
LOC_Os08g45030.1	PGP1, ABCB1,...	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Len_g54677	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
MA_102299g0010	No alias	Putative multidrug resistance protein OS=Oryza sativa...	0.02	OrthoFinder output from all 47 species
MA_10432169g0010	PGP11	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
MA_10436810g0010	No alias	Putative multidrug resistance protein OS=Oryza sativa...	0.03	OrthoFinder output from all 47 species
MA_18863g0020	PGP3, MDR3	ABC transporter B family member 3 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
MA_6870g0010	No alias	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
MA_79399g0010	No alias	Putative multidrug resistance protein OS=Oryza sativa...	0.02	OrthoFinder output from all 47 species
MA_93218g0010	PGP11	ABC transporter B family member 4 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
MA_934204g0010	No alias	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
MA_9415070g0020	No alias	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
Mp2g06270.1	PGP20	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
Mp2g11920.1	ABCB19,...	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Nbi_g02494	PGP2	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g19207	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g30543	PGP18	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g33236	ABCB19,...	ABC-B-type transporter *(AMN3) & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g35743	No alias	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g38163	PGP1, ABCB1, ATPGP1	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g65660	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g13619	No alias	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0146.g023107	PGP2	subfamily ABCB transporter & original description: CDS=729-4781	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0478.g027423	PGP11	subfamily ABCB transporter & original description: CDS=139-3981	0.03	OrthoFinder output from all 47 species
Solyc03g093650.3.1	Solyc03g093650	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Solyc03g122070.3.1	ABCB19,...	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
Tin_g41085	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e023274_P001	PGP2, Zm00001e023274	subfamily ABCB transporter	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140359	ABC-type transporter activity	IEA	Interproscan
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006952	defense response	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	491	542
IPR011527	ABC1_TM_dom	150	421

External Links

No external refs found!

Pnu_g30303 (PGP11)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation