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  5. AT3G25620

AT3G25620


Description : ABC-2 type transporter family protein


Gene families : OG0000438 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000438_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G25620
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00258490 ABCG14,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Ala_g02542 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g18590 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Als_g16669 No alias subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Als_g27548 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene01671.t1 Aspi01Gene01671 subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene09991.t1 Aspi01Gene09991 subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene10921.t1 Aspi01Gene10921 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene10922.t1 Aspi01Gene10922 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene22309.t1 Aspi01Gene22309 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene36520.t1 Aspi01Gene36520 subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g06567 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g22394 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g32789 No alias sporopollenin precursor exporter *(ABCG26) & original... 0.03 OrthoFinder output from all 47 species
Cba_g35182 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.30G014400.1 Ceric.30G014400 subfamily ABCG transporter & original description:... 0.04 OrthoFinder output from all 47 species
Dcu_g19285 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g06144 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01022526001 No alias Solute transport.primary active transport.ABC... 0.01 OrthoFinder output from all 47 species
GSVIVT01034463001 ABCG25, ATABCG25 Solute transport.primary active transport.ABC... 0.01 OrthoFinder output from all 47 species
GSVIVT01036869001 ABCG14 Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Gb_26434 ABCG14 cytokinin transporter (ABCG14). subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Gb_31556 No alias subfamily ABCG transporter 0.01 OrthoFinder output from all 47 species
Gb_38402 ABCG14 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
LOC_Os08g07010.1 ABCG14, LOC_Os08g07010 subfamily ABCG transporter 0.01 OrthoFinder output from all 47 species
Msp_g14978 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31647 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g29229 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g35834 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g37168 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13582 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g15519 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g36408 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g16739 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g20978 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g57469 ABCG26, WBC27 subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0048.g013631 No alias subfamily ABCG transporter & original description: CDS=1-2199 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0062.g015589 No alias not classified & original description: CDS=22-1557 0.03 OrthoFinder output from all 47 species
Solyc04g070970.4.1 Solyc04g070970 subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Spa_g06146 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23153 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g26315 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g21759 ABCG26, WBC27 subfamily ABCG transporter & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
CC GO:0009507 chloroplast ISM Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity ISS Interproscan
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Type GO Term Name Evidence Source
CC GO:0000228 nuclear chromosome IEP HCCA
BP GO:0000302 response to reactive oxygen species IEP HCCA
BP GO:0000303 response to superoxide IEP HCCA
BP GO:0000305 response to oxygen radical IEP HCCA
CC GO:0000793 condensed chromosome IEP HCCA
CC GO:0000794 condensed nuclear chromosome IEP HCCA
BP GO:0001101 response to acid chemical IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0004033 aldo-keto reductase (NADP) activity IEP HCCA
MF GO:0005244 voltage-gated monoatomic ion channel activity IEP HCCA
MF GO:0005253 monoatomic anion channel activity IEP HCCA
MF GO:0005451 obsolete monoatomic cation:proton antiporter activity IEP HCCA
CC GO:0005694 chromosome IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005744 TIM23 mitochondrial import inner membrane translocase complex IEP HCCA
CC GO:0005786 signal recognition particle, endoplasmic reticulum targeting IEP HCCA
CC GO:0005795 Golgi stack IEP HCCA
CC GO:0005819 spindle IEP HCCA
CC GO:0005829 cytosol IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006580 ethanolamine metabolic process IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006617 SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006814 sodium ion transport IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
BP GO:0006865 amino acid transport IEP HCCA
BP GO:0006873 cellular monoatomic ion homeostasis IEP HCCA
BP GO:0006885 regulation of pH IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP HCCA
BP GO:0006972 hyperosmotic response IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008308 voltage-gated monoatomic anion channel activity IEP HCCA
MF GO:0008312 7S RNA binding IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0008509 monoatomic anion transmembrane transporter activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009270 response to humidity IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009404 toxin metabolic process IEP HCCA
BP GO:0009407 toxin catabolic process IEP HCCA
BP GO:0009415 response to water IEP HCCA
CC GO:0009527 plastid outer membrane IEP HCCA
MF GO:0009672 auxin:proton symporter activity IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0009737 response to abscisic acid IEP HCCA
BP GO:0009753 response to jasmonic acid IEP HCCA
BP GO:0009850 auxin metabolic process IEP HCCA
BP GO:0009867 jasmonic acid mediated signaling pathway IEP HCCA
BP GO:0009880 embryonic pattern specification IEP HCCA
BP GO:0009970 cellular response to sulfate starvation IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010037 response to carbon dioxide IEP HCCA
BP GO:0010072 primary shoot apical meristem specification IEP HCCA
BP GO:0010118 stomatal movement IEP HCCA
BP GO:0010193 response to ozone IEP HCCA
BP GO:0010265 SCF complex assembly IEP HCCA
BP GO:0010351 lithium ion transport IEP HCCA
BP GO:0010431 seed maturation IEP HCCA
BP GO:0010583 response to cyclopentenone IEP HCCA
BP GO:0010817 regulation of hormone levels IEP HCCA
CC GO:0012505 endomembrane system IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015081 sodium ion transmembrane transporter activity IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0015301 obsolete anion:anion antiporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0015385 sodium:proton antiporter activity IEP HCCA
MF GO:0015450 protein-transporting ATPase activity IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015804 neutral amino acid transport IEP HCCA
BP GO:0015824 proline transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0019900 kinase binding IEP HCCA
MF GO:0019901 protein kinase binding IEP HCCA
MF GO:0022832 voltage-gated channel activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030007 cellular potassium ion homeostasis IEP HCCA
BP GO:0030104 water homeostasis IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033993 response to lipid IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0034308 primary alcohol metabolic process IEP HCCA
BP GO:0034599 cellular response to oxidative stress IEP HCCA
BP GO:0034614 cellular response to reactive oxygen species IEP HCCA
BP GO:0035725 sodium ion transmembrane transport IEP HCCA
BP GO:0042430 indole-containing compound metabolic process IEP HCCA
BP GO:0042439 ethanolamine-containing compound metabolic process IEP HCCA
BP GO:0042445 hormone metabolic process IEP HCCA
BP GO:0042538 hyperosmotic salinity response IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
BP GO:0042752 regulation of circadian rhythm IEP HCCA
BP GO:0042762 regulation of sulfur metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0045116 protein neddylation IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046685 response to arsenic-containing substance IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
CC GO:0048500 signal recognition particle IEP HCCA
BP GO:0048871 multicellular organismal homeostasis IEP HCCA
BP GO:0048878 chemical homeostasis IEP HCCA
BP GO:0050801 monoatomic ion homeostasis IEP HCCA
BP GO:0050878 regulation of body fluid levels IEP HCCA
BP GO:0050891 multicellular organismal water homeostasis IEP HCCA
MF GO:0051139 metal cation:proton antiporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0052638 indole-3-butyrate beta-glucosyltransferase activity IEP HCCA
BP GO:0055075 potassium ion homeostasis IEP HCCA
BP GO:0055082 cellular chemical homeostasis IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0062197 cellular response to chemical stress IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
BP GO:0070301 cellular response to hydrogen peroxide IEP HCCA
BP GO:0070542 response to fatty acid IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0070887 cellular response to chemical stimulus IEP HCCA
BP GO:0071215 cellular response to abscisic acid stimulus IEP HCCA
BP GO:0071241 cellular response to inorganic substance IEP HCCA
BP GO:0071248 cellular response to metal ion IEP HCCA
BP GO:0071281 cellular response to iron ion IEP HCCA
BP GO:0071396 cellular response to lipid IEP HCCA
BP GO:0071470 cellular response to osmotic stress IEP HCCA
BP GO:0071472 cellular response to salt stress IEP HCCA
BP GO:0071474 cellular hyperosmotic response IEP HCCA
BP GO:0071475 cellular hyperosmotic salinity response IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0080024 indolebutyric acid metabolic process IEP HCCA
MF GO:0080161 auxin transmembrane transporter activity IEP HCCA
BP GO:0090332 stomatal closure IEP HCCA
BP GO:0097305 response to alcohol IEP HCCA
BP GO:0097306 cellular response to alcohol IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
BP GO:0098754 detoxification IEP HCCA
MF GO:0140828 metal cation:monoatomic cation antiporter activity IEP HCCA
BP GO:1901160 primary amino compound metabolic process IEP HCCA
BP GO:1902456 regulation of stomatal opening IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 101 250
No external refs found!