AT3G25710 (BHLH32, ATAIG1, TMO5)

Aliases : BHLH32, ATAIG1, TMO5

Description : basic helix-loop-helix 32

Gene families : OG0001169 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001169_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G25710

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00002p00019320	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.bHLH...	0.04	OrthoFinder output from all 47 species
AT2G40200	No alias	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	0.05	OrthoFinder output from all 47 species
Adi_g033761	No alias	bHLH-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aev_g03176	No alias	bHLH-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g01843	No alias	bHLH-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Als_g09866	No alias	bHLH-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Als_g18451	No alias	bHLH-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Aop_g36805	No alias	bHLH-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene06352.t1	Aspi01Gene06352	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0002.g001194	No alias	bHLH-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Cba_g29521	No alias	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g08102	No alias	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g02891	No alias	bHLH-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g03913	No alias	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g13072	No alias	bHLH-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01011960001	No alias	RNA biosynthesis.transcriptional activation.bHLH...	0.08	OrthoFinder output from all 47 species
GSVIVT01020688001	No alias	RNA biosynthesis.transcriptional activation.bHLH...	0.06	OrthoFinder output from all 47 species
GSVIVT01025747001	No alias	RNA biosynthesis.transcriptional activation.bHLH...	0.04	OrthoFinder output from all 47 species
GSVIVT01032789001	No alias	RNA biosynthesis.transcriptional activation.bHLH...	0.03	OrthoFinder output from all 47 species
LOC_Os01g11910.1	LOC_Os01g11910	transcription factor (bHLH)	0.04	OrthoFinder output from all 47 species
LOC_Os03g15440.1	LOC_Os03g15440	transcription factor (bHLH)	0.09	OrthoFinder output from all 47 species
LOC_Os03g59670.1	LOC_Os03g59670	transcription factor (bHLH)	0.02	OrthoFinder output from all 47 species
LOC_Os05g07120.1	LOC_Os05g07120	transcription factor (bHLH)	0.03	OrthoFinder output from all 47 species
LOC_Os08g33590.1	LOC_Os08g33590	transcription factor (bHLH)	0.05	OrthoFinder output from all 47 species
LOC_Os08g37290.1	BHLH32, ATAIG1,...	transcription factor (bHLH)	0.02	OrthoFinder output from all 47 species
MA_10157g0010	No alias	transcription factor (bHLH)	0.05	OrthoFinder output from all 47 species
MA_65818g0010	No alias	transcription factor (bHLH)	0.05	OrthoFinder output from all 47 species
Msp_g05533	No alias	bHLH-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g17089	No alias	bHLH-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g21895	No alias	bHLH-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g23621	No alias	bHLH-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Pir_g47424	No alias	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g51509	No alias	bHLH-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Smo412681	No alias	RNA biosynthesis.transcriptional activation.bHLH...	0.02	OrthoFinder output from all 47 species
Solyc02g076920.3.1	Solyc02g076920	transcription factor (bHLH)	0.03	OrthoFinder output from all 47 species
Solyc04g006990.3.1	Solyc04g006990	transcription factor (bHLH)	0.04	OrthoFinder output from all 47 species
Solyc04g014360.3.1	Solyc04g014360	transcription factor (bHLH)	0.02	OrthoFinder output from all 47 species
Solyc04g076240.3.1	Solyc04g076240	transcription factor (bHLH)	0.06	OrthoFinder output from all 47 species
Solyc05g009880.3.1	Solyc05g009880	transcription factor (bHLH)	0.09	OrthoFinder output from all 47 species
Solyc06g051260.4.1	Solyc06g051260	transcription factor (bHLH)	0.04	OrthoFinder output from all 47 species
Solyc10g078380.2.1	Solyc10g078380	transcription factor (bHLH)	0.07	OrthoFinder output from all 47 species
Spa_g08576	No alias	bHLH-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g08301	No alias	bHLH-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e001119_P001	Zm00001e001119	transcription factor (bHLH)	0.07	OrthoFinder output from all 47 species
Zm00001e006132_P001	Zm00001e006132	transcription factor (bHLH)	0.04	OrthoFinder output from all 47 species
Zm00001e009812_P001	Zm00001e009812	transcription factor (bHLH)	0.03	OrthoFinder output from all 47 species
Zm00001e009972_P001	Zm00001e009972	transcription factor (bHLH)	0.05	OrthoFinder output from all 47 species
Zm00001e016455_P001	BHLH32, ATAIG1,...	transcription factor (bHLH)	0.05	OrthoFinder output from all 47 species
Zm00001e022445_P001	Zm00001e022445	transcription factor (bHLH)	0.1	OrthoFinder output from all 47 species
Zm00001e034395_P001	Zm00001e034395	transcription factor (bHLH)	0.05	OrthoFinder output from all 47 species
Zm00001e038535_P001	Zm00001e038535	transcription factor (bHLH)	0.09	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	TAS	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0007154	cell communication	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009267	cellular response to starvation	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009718	anthocyanin-containing compound biosynthetic process	IMP	Interproscan
BP	GO:0009812	flavonoid metabolic process	None	Extended
BP	GO:0009813	flavonoid biosynthetic process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0009991	response to extracellular stimulus	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0016036	cellular response to phosphate starvation	IMP	Interproscan
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031667	response to nutrient levels	None	Extended
BP	GO:0031668	cellular response to extracellular stimulus	None	Extended
BP	GO:0031669	cellular response to nutrient levels	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0042440	pigment metabolic process	None	Extended
BP	GO:0042594	response to starvation	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0046148	pigment biosynthetic process	None	Extended
BP	GO:0046283	anthocyanin-containing compound metabolic process	None	Extended
BP	GO:0048364	root development	IEP	Interproscan
BP	GO:0048468	cell development	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071496	cellular response to external stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0080147	root hair cell development	IMP	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0099402	plant organ development	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006084	acetyl-CoA metabolic process	IEP	HCCA
BP	GO:0006637	acyl-CoA metabolic process	IEP	HCCA
BP	GO:0006869	lipid transport	IEP	HCCA
BP	GO:0007015	actin filament organization	IEP	HCCA
BP	GO:0007062	sister chromatid cohesion	IEP	HCCA
BP	GO:0007155	cell adhesion	IEP	HCCA
BP	GO:0008284	positive regulation of cell population proliferation	IEP	HCCA
BP	GO:0009799	specification of symmetry	IEP	HCCA
BP	GO:0009855	determination of bilateral symmetry	IEP	HCCA
BP	GO:0009880	embryonic pattern specification	IEP	HCCA
BP	GO:0009887	animal organ morphogenesis	IEP	HCCA
BP	GO:0009944	polarity specification of adaxial/abaxial axis	IEP	HCCA
BP	GO:0010014	meristem initiation	IEP	HCCA
BP	GO:0010065	primary meristem tissue development	IEP	HCCA
BP	GO:0010067	procambium histogenesis	IEP	HCCA
BP	GO:0010072	primary shoot apical meristem specification	IEP	HCCA
BP	GO:0010087	phloem or xylem histogenesis	IEP	HCCA
BP	GO:0010089	xylem development	IEP	HCCA
BP	GO:0010090	trichome morphogenesis	IEP	HCCA
BP	GO:0010431	seed maturation	IEP	HCCA
BP	GO:0010638	positive regulation of organelle organization	IEP	HCCA
BP	GO:0016125	sterol metabolic process	IEP	HCCA
BP	GO:0016126	sterol biosynthetic process	IEP	HCCA
BP	GO:0016128	phytosteroid metabolic process	IEP	HCCA
BP	GO:0016129	phytosteroid biosynthetic process	IEP	HCCA
BP	GO:0016131	brassinosteroid metabolic process	IEP	HCCA
BP	GO:0016132	brassinosteroid biosynthetic process	IEP	HCCA
BP	GO:0033043	regulation of organelle organization	IEP	HCCA
BP	GO:0033044	regulation of chromosome organization	IEP	HCCA
BP	GO:0033865	nucleoside bisphosphate metabolic process	IEP	HCCA
BP	GO:0033875	ribonucleoside bisphosphate metabolic process	IEP	HCCA
BP	GO:0034032	purine nucleoside bisphosphate metabolic process	IEP	HCCA
BP	GO:0035383	thioester metabolic process	IEP	HCCA
BP	GO:0042127	regulation of cell population proliferation	IEP	HCCA
BP	GO:0045010	actin nucleation	IEP	HCCA
BP	GO:0045595	regulation of cell differentiation	IEP	HCCA
BP	GO:0045597	positive regulation of cell differentiation	IEP	HCCA
CC	GO:0046658	obsolete anchored component of plasma membrane	IEP	HCCA
BP	GO:0048469	cell maturation	IEP	HCCA
BP	GO:0048507	meristem development	IEP	HCCA
BP	GO:0048508	embryonic meristem development	IEP	HCCA
BP	GO:0048764	trichoblast maturation	IEP	HCCA
BP	GO:0048765	root hair cell differentiation	IEP	HCCA
BP	GO:0051094	positive regulation of developmental process	IEP	HCCA
BP	GO:0051130	positive regulation of cellular component organization	IEP	HCCA
BP	GO:0051301	cell division	IEP	HCCA
BP	GO:0065001	specification of axis polarity	IEP	HCCA
BP	GO:0090421	embryonic meristem initiation	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR011598	bHLH_dom	134	181

External Links

No external refs found!

AT3G25710 (BHLH32, ATAIG1, TMO5)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation