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  5. Pnu_g30309

Pnu_g30309 (CRR2)


Aliases : CRR2

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g30309
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
Adi_g003785 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g011101 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g023352 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g034933 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g036683 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g040826 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g061193 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g02126 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g18040 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g23642 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g33237 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04451 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g18809 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g30899 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g55319 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g57762 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g61738 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27592 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g36682 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g37107 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20851 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.10G029900.1 Ceric.10G029900 not classified & original description: pacid=50612941... 0.03 OrthoFinder output from all 47 species
Ceric.18G024700.1 Ceric.18G024700 not classified & original description: pacid=50621916... 0.02 OrthoFinder output from all 47 species
Ceric.27G013400.1 Ceric.27G013400 not classified & original description: pacid=50605328... 0.03 OrthoFinder output from all 47 species
Ceric.28G051100.1 Ceric.28G051100 not classified & original description: pacid=50570532... 0.03 OrthoFinder output from all 47 species
Ceric.32G026500.1 CRR2, Ceric.32G026500 not classified & original description: pacid=50597944... 0.03 OrthoFinder output from all 47 species
Dcu_g05745 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g22855 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g49227 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22846 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23994 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g27009 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12053 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g18152 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18942 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g44704 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_50789g0010 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.02 OrthoFinder output from all 47 species
MA_84538g0010 EMB2261 Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
Msp_g17295 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g09158 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g17481 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g17591 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g21836 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g22640 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13570 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g02794 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g03152 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g03862 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g19871 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g20771 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g22860 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g23593 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g29797 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g30093 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30593 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g30637 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g59294 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g08102 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g28767 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g38191 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo101239 EMB2758 Pentatricopeptide repeat-containing protein At4g33990... 0.03 OrthoFinder output from all 47 species
Zm00001e013166_P001 Zm00001e013166 Pentatricopeptide repeat-containing protein At4g14820... 0.02 OrthoFinder output from all 47 species
Zm00001e013232_P001 Zm00001e013232 Pentatricopeptide repeat-containing protein At2g36730... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006553 lysine metabolic process IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
CC GO:0008250 oligosaccharyltransferase complex IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0008837 diaminopimelate epimerase activity IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009085 lysine biosynthetic process IEP HCCA
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016854 racemase and epimerase activity IEP HCCA
MF GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0036361 racemase activity, acting on amino acids and derivatives IEP HCCA
BP GO:0043648 dicarboxylic acid metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046451 diaminopimelate metabolic process IEP HCCA
MF GO:0047661 amino-acid racemase activity IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 25 49
IPR002885 Pentatricopeptide_repeat 228 250
IPR002885 Pentatricopeptide_repeat 328 352
IPR046848 E_motif 371 433
IPR002885 Pentatricopeptide_repeat 253 301
IPR002885 Pentatricopeptide_repeat 152 200
IPR002885 Pentatricopeptide_repeat 52 99
No external refs found!