Aliases : ATRZ-1A
Description : RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain
Gene families : OG0000073 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000073_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00002p00251200 | evm_27.TU.AmTr_v1... | Glycine-rich RNA-binding protein RZ1C OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00154p00024620 | GR-RBP3,... | RNA processing.organelle machineries.RNA... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g016820 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g108265 | No alias | RNA chaperone *(RZ1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g10511 | GR-RBP3 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g11662 | No alias | RNA chaperone *(RZ1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene50216.t1 | GRP2, ATGRP2,... | RNA editing factor *(ORRM3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g05276 | GRP2, ATGRP2, GR-RBP2 | RNA editing factor *(ORRM3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g14006 | ATRZ-1A | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Cre09.g392350 | GRP2, ATGRP2, GR-RBP2 | Glycine-rich RNA-binding protein 2, mitochondrial... | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g45667 | GRP2, ATGRP2, GR-RBP2 | RNA editing factor *(ORRM3) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g21776 | GRP2, ATGRP2, GR-RBP2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01021024001 | GRP2, ATGRP2, GR-RBP2 | RNA processing.organelle machineries.RNA... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_26296 | GR-RBP3 | RNA editing factor (ORRM) | 0.04 | OrthoFinder output from all 47 species | |
| Gb_40269 | No alias | RNA chaperone (RZ1|GR-RBP) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os07g08960.1 | LOC_Os07g08960 | RNA chaperone (RZ1|GR-RBP) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os10g17454.1 | GR-RBP3, LOC_Os10g17454 | RNA editing factor (ORRM) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os12g31800.1 | GR-RBP3, LOC_Os12g31800 | RNA editing factor (ORRM) | 0.05 | OrthoFinder output from all 47 species | |
| Len_g30141 | ATRZ-1A | RNA chaperone *(RZ1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_10428777g0010 | CCR2, ATGRP7,... | Glycine-rich RNA-binding protein GRP1A OS=Sinapis alba... | 0.04 | OrthoFinder output from all 47 species | |
| MA_168323g0010 | No alias | RNA chaperone (RZ1|GR-RBP) | 0.03 | OrthoFinder output from all 47 species | |
| MA_2290596g0010 | GR-RBP3 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g01621 | No alias | RNA chaperone *(RZ1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g07947 | GRP2, ATGRP2, GR-RBP2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g31219 | No alias | RNA chaperone *(RZ1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g42936 | No alias | RNA chaperone *(RZ1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g10142 | ATRZ-1A | RNA chaperone *(RZ1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g26099 | CCR2, ATGRP7,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c12_23410V3.1 | GRP2, ATGRP2,... | glycine-rich RNA-binding protein 3 | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c12_23420V3.1 | GRP2, ATGRP2,... | glycine-rich RNA-binding protein 3 | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c4_6610V3.1 | GRP2, ATGRP2,... | glycine-rich RNA-binding protein 3 | 0.01 | OrthoFinder output from all 47 species | |
| Pp3c7_3360V3.1 | CCR1, GR-RBP8,... | cold, circadian rhythm, and RNA binding 1 | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g41843 | GR-RBP4, GRP4 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g104840.4.1 | ATRZ-1A, Solyc01g104840 | RNA chaperone (RZ1|GR-RBP) | 0.1 | OrthoFinder output from all 47 species | |
| Solyc05g053780.4.1 | GRP2, ATGRP2,... | RNA chaperone (RZ1|GR-RBP). RNA editing factor (ORRM) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc10g081180.2.1 | GR-RBP3, Solyc10g081180 | RNA chaperone (RZ1|GR-RBP). RNA editing factor (ORRM) | 0.05 | OrthoFinder output from all 47 species | |
| Solyc11g008210.3.1 | Solyc11g008210 | Glycine-rich RNA-binding protein RZ1B OS=Arabidopsis... | 0.08 | OrthoFinder output from all 47 species | |
| Spa_g20439 | GRP2, ATGRP2, GR-RBP2 | RNA editing factor *(ORRM3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g06526 | No alias | RNA chaperone *(RZ1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e005260_P002 | Zm00001e005260 | RNA chaperone (RZ1|GR-RBP) | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e012278_P001 | Zm00001e012278 | RNA chaperone (RZ1|GR-RBP) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e017933_P003 | CCR2, ATGRP7,... | RNA chaperone (RZ1|GR-RBP) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e018330_P004 | GR-RBP3, Zm00001e018330 | RNA editing factor (ORRM) | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e033010_P001 | Zm00001e033010 | RNA chaperone (RZ1|GR-RBP) | 0.11 | OrthoFinder output from all 47 species | |
| Zm00001e039608_P001 | GR-RBP3, Zm00001e039608 | RNA editing factor (ORRM) | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IDA | Interproscan |
| MF | GO:0003723 | RNA binding | ISS | Interproscan |
| CC | GO:0005634 | nucleus | IDA | Interproscan |
| CC | GO:0005737 | cytoplasm | IDA | Interproscan |
| CC | GO:0005829 | cytosol | IDA | Interproscan |
| BP | GO:0009409 | response to cold | IMP | Interproscan |
| BP | GO:0009631 | cold acclimation | IGI | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004857 | enzyme inhibitor activity | IEP | HCCA |
| MF | GO:0004864 | protein phosphatase inhibitor activity | IEP | HCCA |
| BP | GO:0006260 | DNA replication | IEP | HCCA |
| BP | GO:0006261 | DNA-templated DNA replication | IEP | HCCA |
| BP | GO:0006270 | DNA replication initiation | IEP | HCCA |
| BP | GO:0006275 | regulation of DNA replication | IEP | HCCA |
| BP | GO:0008283 | cell population proliferation | IEP | HCCA |
| BP | GO:0009165 | nucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0010090 | trichome morphogenesis | IEP | HCCA |
| BP | GO:0010921 | regulation of phosphatase activity | IEP | HCCA |
| MF | GO:0019208 | phosphatase regulator activity | IEP | HCCA |
| MF | GO:0019212 | phosphatase inhibitor activity | IEP | HCCA |
| BP | GO:0019220 | regulation of phosphate metabolic process | IEP | HCCA |
| MF | GO:0019888 | protein phosphatase regulator activity | IEP | HCCA |
| MF | GO:0030234 | enzyme regulator activity | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031399 | regulation of protein modification process | IEP | HCCA |
| BP | GO:0032392 | DNA geometric change | IEP | HCCA |
| BP | GO:0032508 | DNA duplex unwinding | IEP | HCCA |
| BP | GO:0035303 | regulation of dephosphorylation | IEP | HCCA |
| BP | GO:0035304 | regulation of protein dephosphorylation | IEP | HCCA |
| BP | GO:0042023 | DNA endoreduplication | IEP | HCCA |
| BP | GO:0043666 | regulation of phosphoprotein phosphatase activity | IEP | HCCA |
| BP | GO:0044786 | cell cycle DNA replication | IEP | HCCA |
| BP | GO:0045787 | positive regulation of cell cycle | IEP | HCCA |
| BP | GO:0050790 | regulation of catalytic activity | IEP | HCCA |
| BP | GO:0051052 | regulation of DNA metabolic process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051174 | regulation of phosphorus metabolic process | IEP | HCCA |
| BP | GO:0051246 | regulation of protein metabolic process | IEP | HCCA |
| BP | GO:0051276 | chromosome organization | IEP | HCCA |
| BP | GO:0051302 | regulation of cell division | IEP | HCCA |
| BP | GO:0051336 | regulation of hydrolase activity | IEP | HCCA |
| BP | GO:0051445 | regulation of meiotic cell cycle | IEP | HCCA |
| BP | GO:0051446 | positive regulation of meiotic cell cycle | IEP | HCCA |
| BP | GO:0051726 | regulation of cell cycle | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065009 | regulation of molecular function | IEP | HCCA |
| BP | GO:0071103 | DNA conformation change | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| BP | GO:0080163 | regulation of protein serine/threonine phosphatase activity | IEP | HCCA |
| MF | GO:0098772 | molecular function regulator activity | IEP | HCCA |
| MF | GO:0140678 | molecular function inhibitor activity | IEP | HCCA |
| BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | HCCA |
| BP | GO:2000243 | positive regulation of reproductive process | IEP | HCCA |
| No external refs found! |
