AT3G27240


Description : Cytochrome C1 family


Gene families : OG0002705 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002705_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G27240
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
Ala_g17343 No alias apocytochrome c1 component of cytochrome c reductase... 0.02 OrthoFinder output from all 47 species
Als_g04882 No alias apocytochrome c1 component of cytochrome c reductase... 0.05 OrthoFinder output from all 47 species
Aop_g00430 No alias apocytochrome c1 component of cytochrome c reductase... 0.07 OrthoFinder output from all 47 species
Azfi_s0262.g060839 No alias apocytochrome c1 component of cytochrome c reductase... 0.14 OrthoFinder output from all 47 species
Ceric.32G048300.1 Ceric.32G048300 apocytochrome c1 component of cytochrome c reductase... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000203.23 No alias Cellular respiration.oxidative... 0.08 OrthoFinder output from all 47 species
Cre15.g638500 No alias Cellular respiration.oxidative... 0.13 OrthoFinder output from all 47 species
Ehy_g08245 No alias apocytochrome c1 component of cytochrome c reductase... 0.04 OrthoFinder output from all 47 species
GSVIVT01001830001 No alias Cellular respiration.oxidative... 0.05 OrthoFinder output from all 47 species
LOC_Os05g23620.1 LOC_Os05g23620 cytochrome c1 component of cytochrome c reductase complex 0.24 OrthoFinder output from all 47 species
Len_g18859 No alias apocytochrome c1 component of cytochrome c reductase... 0.02 OrthoFinder output from all 47 species
MA_10429544g0010 No alias cytochrome c1 component of cytochrome c reductase complex 0.05 OrthoFinder output from all 47 species
MA_10429544g0030 No alias cytochrome c1 component of cytochrome c reductase complex 0.05 OrthoFinder output from all 47 species
Mp8g04690.1 No alias cytochrome c1 component of cytochrome c reductase complex 0.13 OrthoFinder output from all 47 species
Msp_g01940 No alias apocytochrome c1 component of cytochrome c reductase... 0.03 OrthoFinder output from all 47 species
Ore_g06373 No alias apocytochrome c1 component of cytochrome c reductase... 0.02 OrthoFinder output from all 47 species
Pir_g02514 No alias apocytochrome c1 component of cytochrome c reductase... 0.03 OrthoFinder output from all 47 species
Pnu_g00373 No alias apocytochrome c1 component of cytochrome c reductase... 0.02 OrthoFinder output from all 47 species
Sam_g38289 No alias apocytochrome c1 component of cytochrome c reductase... 0.02 OrthoFinder output from all 47 species
Smo177642 No alias Cellular respiration.oxidative... 0.08 OrthoFinder output from all 47 species
Solyc02g093900.3.1 Solyc02g093900 cytochrome c1 component of cytochrome c reductase complex 0.21 OrthoFinder output from all 47 species
Solyc06g067920.3.1 Solyc06g067920 cytochrome c1 component of cytochrome c reductase complex 0.12 OrthoFinder output from all 47 species
Spa_g26253 No alias apocytochrome c1 component of cytochrome c reductase... 0.06 OrthoFinder output from all 47 species
Tin_g21468 No alias apocytochrome c1 component of cytochrome c reductase... 0.05 OrthoFinder output from all 47 species
Zm00001e003946_P001 Zm00001e003946 cytochrome c1 component of cytochrome c reductase complex 0.17 OrthoFinder output from all 47 species
Zm00001e022083_P001 Zm00001e022083 cytochrome c1 component of cytochrome c reductase complex 0.16 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion IDA Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
CC GO:0005746 mitochondrial respirasome ISS Interproscan
CC GO:0005750 mitochondrial respiratory chain complex III IDA Interproscan
CC GO:0005773 vacuole IDA Interproscan
CC GO:0005774 vacuolar membrane IDA Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
BP GO:0006096 glycolytic process RCA Interproscan
BP GO:0006098 pentose-phosphate shunt RCA Interproscan
BP GO:0006511 ubiquitin-dependent protein catabolic process RCA Interproscan
BP GO:0009060 aerobic respiration RCA Interproscan
BP GO:0009651 response to salt stress RCA Interproscan
BP GO:0009853 photorespiration RCA Interproscan
CC GO:0016020 membrane IDA Interproscan
BP GO:0046686 response to cadmium ion RCA Interproscan
BP GO:0051788 response to misfolded protein RCA Interproscan
BP GO:0080129 proteasome core complex assembly RCA Interproscan
Type GO Term Name Evidence Source
CC GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) IEP HCCA
MF GO:0000295 adenine nucleotide transmembrane transporter activity IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003727 single-stranded RNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003954 NADH dehydrogenase activity IEP HCCA
MF GO:0003955 NAD(P)H dehydrogenase (quinone) activity IEP HCCA
MF GO:0003979 UDP-glucose 6-dehydrogenase activity IEP HCCA
MF GO:0004017 adenylate kinase activity IEP HCCA
MF GO:0004089 carbonate dehydratase activity IEP HCCA
MF GO:0004151 dihydroorotase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004333 fumarate hydratase activity IEP HCCA
MF GO:0004439 phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity IEP HCCA
MF GO:0004448 isocitrate dehydrogenase [NAD(P)+] activity IEP HCCA
MF GO:0004449 isocitrate dehydrogenase (NAD+) activity IEP HCCA
MF GO:0004634 phosphopyruvate hydratase activity IEP HCCA
MF GO:0004738 pyruvate dehydrogenase activity IEP HCCA
MF GO:0004739 pyruvate dehydrogenase (acetyl-transferring) activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005261 monoatomic cation channel activity IEP HCCA
MF GO:0005346 purine ribonucleotide transmembrane transporter activity IEP HCCA
MF GO:0005347 ATP transmembrane transporter activity IEP HCCA
MF GO:0005471 ATP:ADP antiporter activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
CC GO:0005618 cell wall IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005740 mitochondrial envelope IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
CC GO:0005743 mitochondrial inner membrane IEP HCCA
CC GO:0005747 mitochondrial respiratory chain complex I IEP HCCA
CC GO:0005753 mitochondrial proton-transporting ATP synthase complex IEP HCCA
CC GO:0005758 mitochondrial intermembrane space IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
CC GO:0005911 cell-cell junction IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006007 glucose catabolic process IEP HCCA
BP GO:0006065 UDP-glucuronate biosynthetic process IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006085 acetyl-CoA biosynthetic process IEP HCCA
BP GO:0006094 gluconeogenesis IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0006102 isocitrate metabolic process IEP HCCA
BP GO:0006120 mitochondrial electron transport, NADH to ubiquinone IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006714 sesquiterpenoid metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006862 nucleotide transport IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0008064 regulation of actin polymerization or depolymerization IEP HCCA
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP HCCA
MF GO:0008187 poly-pyrimidine tract binding IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008266 poly(U) RNA binding IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009225 nucleotide-sugar metabolic process IEP HCCA
BP GO:0009226 nucleotide-sugar biosynthetic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
CC GO:0009506 plasmodesma IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009526 plastid envelope IEP HCCA
CC GO:0009536 plastid IEP HCCA
BP GO:0009735 response to cytokinin IEP HCCA
BP GO:0009743 response to carbohydrate IEP HCCA
BP GO:0009744 response to sucrose IEP HCCA
BP GO:0009746 response to hexose IEP HCCA
BP GO:0009749 response to glucose IEP HCCA
BP GO:0009750 response to fructose IEP HCCA
BP GO:0009788 negative regulation of abscisic acid-activated signaling pathway IEP HCCA
CC GO:0009941 chloroplast envelope IEP HCCA
BP GO:0010498 proteasomal protein catabolic process IEP HCCA
BP GO:0010639 negative regulation of organelle organization IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015215 nucleotide transmembrane transporter activity IEP HCCA
MF GO:0015216 purine nucleotide transmembrane transporter activity IEP HCCA
MF GO:0015217 ADP transmembrane transporter activity IEP HCCA
MF GO:0015252 proton channel activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
MF GO:0015605 organophosphate ester transmembrane transporter activity IEP HCCA
BP GO:0015865 purine nucleotide transport IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016093 polyprenol metabolic process IEP HCCA
CC GO:0016469 proton-transporting two-sector ATPase complex IEP HCCA
BP GO:0016487 farnesol metabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP HCCA
MF GO:0016812 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
MF GO:0019205 nucleobase-containing compound kinase activity IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0019319 hexose biosynthetic process IEP HCCA
BP GO:0019320 hexose catabolic process IEP HCCA
BP GO:0019321 pentose metabolic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019646 aerobic electron transport chain IEP HCCA
CC GO:0019866 organelle inner membrane IEP HCCA
BP GO:0019932 second-messenger-mediated signaling IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0022904 respiratory electron transport chain IEP HCCA
CC GO:0030054 cell junction IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
CC GO:0030427 site of polarized growth IEP HCCA
BP GO:0030832 regulation of actin filament length IEP HCCA
BP GO:0030833 regulation of actin filament polymerization IEP HCCA
BP GO:0030834 regulation of actin filament depolymerization IEP HCCA
BP GO:0030835 negative regulation of actin filament depolymerization IEP HCCA
BP GO:0030837 negative regulation of actin filament polymerization IEP HCCA
CC GO:0030964 NADH dehydrogenase complex IEP HCCA
BP GO:0031333 negative regulation of protein-containing complex assembly IEP HCCA
CC GO:0031520 plasma membrane of cell tip IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031967 organelle envelope IEP HCCA
CC GO:0031970 organelle envelope lumen IEP HCCA
CC GO:0031975 envelope IEP HCCA
BP GO:0032271 regulation of protein polymerization IEP HCCA
BP GO:0032272 negative regulation of protein polymerization IEP HCCA
BP GO:0032956 regulation of actin cytoskeleton organization IEP HCCA
BP GO:0032957 inositol trisphosphate metabolic process IEP HCCA
BP GO:0032970 regulation of actin filament-based process IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
BP GO:0033866 nucleoside bisphosphate biosynthetic process IEP HCCA
BP GO:0034030 ribonucleoside bisphosphate biosynthetic process IEP HCCA
BP GO:0034033 purine nucleoside bisphosphate biosynthetic process IEP HCCA
BP GO:0034284 response to monosaccharide IEP HCCA
BP GO:0034285 response to disaccharide IEP HCCA
BP GO:0034308 primary alcohol metabolic process IEP HCCA
MF GO:0034593 phosphatidylinositol bisphosphate phosphatase activity IEP HCCA
MF GO:0034595 phosphatidylinositol phosphate 5-phosphatase activity IEP HCCA
MF GO:0034596 phosphatidylinositol phosphate 4-phosphatase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0035384 thioester biosynthetic process IEP HCCA
CC GO:0035838 growing cell tip IEP HCCA
BP GO:0042350 GDP-L-fucose biosynthetic process IEP HCCA
BP GO:0042732 D-xylose metabolic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043242 negative regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043244 regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043254 regulation of protein-containing complex assembly IEP HCCA
MF GO:0043812 phosphatidylinositol-4-phosphate phosphatase activity IEP HCCA
BP GO:0044087 regulation of cellular component biogenesis IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
CC GO:0045259 proton-transporting ATP synthase complex IEP HCCA
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP HCCA
CC GO:0045271 respiratory chain complex I IEP HCCA
BP GO:0046164 alcohol catabolic process IEP HCCA
BP GO:0046174 polyol catabolic process IEP HCCA
BP GO:0046364 monosaccharide biosynthetic process IEP HCCA
BP GO:0046365 monosaccharide catabolic process IEP HCCA
BP GO:0046368 GDP-L-fucose metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0046398 UDP-glucuronate metabolic process IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP HCCA
BP GO:0046855 inositol phosphate dephosphorylation IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP HCCA
MF GO:0047886 farnesol dehydrogenase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0048768 root hair cell tip growth IEP HCCA
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP HCCA
MF GO:0050145 nucleoside monophosphate kinase activity IEP HCCA
MF GO:0050897 cobalt ion binding IEP HCCA
MF GO:0051015 actin filament binding IEP HCCA
BP GO:0051017 actin filament bundle assembly IEP HCCA
BP GO:0051129 negative regulation of cellular component organization IEP HCCA
CC GO:0051286 cell tip IEP HCCA
BP GO:0051493 regulation of cytoskeleton organization IEP HCCA
BP GO:0051494 negative regulation of cytoskeleton organization IEP HCCA
BP GO:0051693 actin filament capping IEP HCCA
MF GO:0052744 phosphatidylinositol monophosphate phosphatase activity IEP HCCA
MF GO:0052866 phosphatidylinositol phosphate phosphatase activity IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
CC GO:0060187 cell pole IEP HCCA
BP GO:0061572 actin filament bundle organization IEP HCCA
CC GO:0070161 anchoring junction IEP HCCA
BP GO:0071545 inositol phosphate catabolic process IEP HCCA
BP GO:0071616 acyl-CoA biosynthetic process IEP HCCA
BP GO:0072350 tricarboxylic acid metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
CC GO:0090404 pollen tube tip IEP HCCA
CC GO:0098590 plasma membrane region IEP HCCA
MF GO:0106019 phosphatidylinositol-4,5-bisphosphate phosphatase activity IEP HCCA
BP GO:0110053 regulation of actin filament organization IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901420 negative regulation of response to alcohol IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901616 organic hydroxy compound catabolic process IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA
BP GO:1901879 regulation of protein depolymerization IEP HCCA
BP GO:1901880 negative regulation of protein depolymerization IEP HCCA
BP GO:1902652 secondary alcohol metabolic process IEP HCCA
BP GO:1902903 regulation of supramolecular fiber organization IEP HCCA
BP GO:1902904 negative regulation of supramolecular fiber organization IEP HCCA
CC GO:1904949 ATPase complex IEP HCCA
BP GO:1905958 negative regulation of cellular response to alcohol IEP HCCA
InterPro domains Description Start Stop
IPR002326 Cyt_c1 78 294
No external refs found!