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  5. AT3G28250

AT3G28250


Description : Carbohydrate-binding X8 domain superfamily protein


Gene families : OG0000198 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000198_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G28250
Cluster HCCA: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00136030 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.03 OrthoFinder output from all 47 species
AT1G78520 No alias Carbohydrate-binding X8 domain superfamily protein 0.07 OrthoFinder output from all 47 species
AT4G09462 No alias Carbohydrate-binding X8 domain superfamily protein 0.15 OrthoFinder output from all 47 species
AT4G09464 No alias Carbohydrate-binding X8 domain superfamily protein 0.14 OrthoFinder output from all 47 species
AT4G09465 No alias Carbohydrate-binding X8 domain superfamily protein 0.13 OrthoFinder output from all 47 species
AT4G09466 No alias Carbohydrate-binding X8 domain superfamily protein 0.13 OrthoFinder output from all 47 species
AT4G09467 No alias Carbohydrate-binding X8 domain superfamily protein 0.14 OrthoFinder output from all 47 species
AT5G53610 No alias Carbohydrate-binding X8 domain superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G63230 No alias Carbohydrate-binding X8 domain superfamily protein 0.06 OrthoFinder output from all 47 species
AT5G63240 No alias Carbohydrate-binding X8 domain superfamily protein 0.05 OrthoFinder output from all 47 species
AT5G63250 No alias Carbohydrate-binding X8 domain superfamily protein 0.08 OrthoFinder output from all 47 species
Dac_g21552 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g37072 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01036726001 No alias PLASMODESMATA CALLOSE-BINDING PROTEIN 2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os01g14140.1 LOC_Os01g14140 Glucan endo-1,3-beta-D-glucosidase OS=Olea europaea... 0.03 OrthoFinder output from all 47 species
Lfl_g18119 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g39197 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g24240 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g55633 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc07g062020.2.1 Solyc07g062020 Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum... 0.04 OrthoFinder output from all 47 species
Solyc11g012580.2.1 Solyc11g012580 Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g46844 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e002008_P001 PDCB2, E13L3,... Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e007819_P002 Zm00001e007819 Glucan endo-1,3-beta-D-glucosidase OS=Olea europaea... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005886 plasma membrane ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
BP GO:0009828 plant-type cell wall loosening IEP HCCA
BP GO:0009831 plant-type cell wall modification involved in multidimensional cell growth IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
BP GO:0042547 cell wall modification involved in multidimensional cell growth IEP HCCA
MF GO:0046910 pectinesterase inhibitor activity IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR012946 X8 2 71
No external refs found!