AT3G28580

Description : P-loop containing nucleoside triphosphate hydrolases superfamily protein

Gene families : OG0000163 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000163_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G28580

Target	Alias	Description	ECC score	Gene Family Method
AT3G28540	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.03	OrthoFinder output from all 47 species
Adi_g031480	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g12196	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g55732	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g61783	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ceric.19G070800.1	Ceric.19G070800	not classified & original description: pacid=50576389...	0.04	OrthoFinder output from all 47 species
Ceric.19G071100.1	Ceric.19G071100	not classified & original description: pacid=50575396...	0.04	OrthoFinder output from all 47 species
Dac_g34932	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01032557001	AATP1	AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
Gb_27548	AATP1	AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
LOC_Os01g19260.1	AATP1, LOC_Os01g19260	AAA-ATPase At3g28580 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
LOC_Os01g42030.1	BCS1, LOC_Os01g42030	Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
LOC_Os03g02330.1	LOC_Os03g02330	AAA-ATPase At2g46620 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
LOC_Os12g28550.1	LOC_Os12g28550	AAA-ATPase At5g40000 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
Len_g13406	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
MA_10435468g0020	No alias	AAA-ATPase At3g28510 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
MA_344969g0010	No alias	AAA-ATPase At4g25835 OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
Pir_g04536	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0132.g022181	No alias	not classified & original description: CDS=1-984	0.05	OrthoFinder output from all 47 species
Solyc10g007280.4.1	BCS1, Solyc10g007280	Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Solyc12g055810.1.1	Solyc12g055810	AAA-ATPase At5g57480 OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
Spa_g39884	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g13421	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e027961_P001	Zm00001e027961	AAA-ATPase At3g50940 OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005783	endoplasmic reticulum	IDA	Interproscan
CC	GO:0005886	plasma membrane	ISM	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009723	response to ethylene	RCA	Interproscan
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009737	response to abscisic acid	IEP	Interproscan
BP	GO:0009737	response to abscisic acid	RCA	Interproscan
BP	GO:0010033	response to organic substance	None	Extended
CC	GO:0016020	membrane	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	ISS	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0033993	response to lipid	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0042221	response to chemical	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0097305	response to alcohol	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0008270	zinc ion binding	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003959	ATPase_AAA_core	244	392
IPR025753	AAA_N_dom	40	121

External Links

No external refs found!

AT3G28580

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation