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  5. AT3G28917

AT3G28917 (MIF2)


Aliases : MIF2

Description : mini zinc finger 2


Gene families : OG0000204 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000204_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G28917
Cluster HCCA: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00261620 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.06 OrthoFinder output from all 47 species
AMTR_s00070p00154800 ATHB22, MEE68,... RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
AMTR_s00119p00074870 MIF2,... RNA biosynthesis.transcriptional activation.HB... 0.06 OrthoFinder output from all 47 species
AT1G74660 MIF1 mini zinc finger 1 0.04 OrthoFinder output from all 47 species
Adi_g080209 AtHB31, ZHD4, HB31 zf-HD-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g48693 ATHB22, MEE68, ZHD2, HB22 zf-HD-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g11999 AtHB31, ZHD4, HB31 zf-HD-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g27958 ATHB22, MEE68, ZHD2, HB22 zf-HD-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g34945 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g09523 AtHB31, ZHD4, HB31 zf-HD-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g20121 AtHB31, ZHD4, HB31 zf-HD-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g21097 ATHB22, MEE68, ZHD2, HB22 zf-HD-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g31503 AtHB31, ZHD4, HB31 zf-HD-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g08358 AtHB31, ZHD4, HB31 zf-HD-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g18764 AtHB31, ZHD4, HB31 zf-HD-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g04717 AtHB31, ZHD4, HB31 zf-HD-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g10497 AtHB31, ZHD4, HB31 zf-HD-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene05834.t1 ATHB22, MEE68,... zf-HD-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene59294.t1 ATHB22, MEE68,... zf-HD-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0047.g030326 ATHB22, MEE68, ZHD2, HB22 zf-HD-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Azfi_s0116.g046426 ATHB22, MEE68, ZHD2, HB22 zf-HD-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Cba_g03861 AtHB31, ZHD4, HB31 zf-HD-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07428 AtHB31, ZHD4, HB31 zf-HD-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g12626 ATHB22, MEE68, ZHD2, HB22 zf-HD-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g33578 AtHB31, ZHD4, HB31 zf-HD-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g03700 AtHB31, ZHD4, HB31 zf-HD-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g13123 AtHB31, ZHD4, HB31 zf-HD-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04280 ATHB22, MEE68, ZHD2, HB22 zf-HD-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g31638 ATHB22, MEE68, ZHD2, HB22 zf-HD-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01000250001 No alias RNA biosynthesis.transcriptional activation.HB... 0.07 OrthoFinder output from all 47 species
Gb_15163 ATHB22, MEE68, ZHD2, HB22 transcription factor (zf-HD) 0.05 OrthoFinder output from all 47 species
LOC_Os08g34010.1 ZHD8, ATHB30,... transcription factor (zf-HD) 0.02 OrthoFinder output from all 47 species
LOC_Os09g24810.1 LOC_Os09g24810 transcription factor (zf-HD) 0.03 OrthoFinder output from all 47 species
LOC_Os12g03110.1 MIF2, LOC_Os12g03110 transcription factor (zf-HD) 0.03 OrthoFinder output from all 47 species
Lfl_g19325 AtHB31, ZHD4, HB31 zf-HD-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
MA_101972g0010 ATHB22, MEE68, ZHD2, HB22 transcription factor (zf-HD) 0.02 OrthoFinder output from all 47 species
MA_144114g0010 MIF2 transcription factor (zf-HD) 0.03 OrthoFinder output from all 47 species
MA_147745g0020 MIF2 transcription factor (zf-HD) 0.03 OrthoFinder output from all 47 species
MA_171206g0010 MIF2 transcription factor (zf-HD) 0.03 OrthoFinder output from all 47 species
MA_173815g0010 MIF2 transcription factor (zf-HD) 0.03 OrthoFinder output from all 47 species
MA_19630g0020 ATHB22, MEE68, ZHD2, HB22 transcription factor (zf-HD) 0.03 OrthoFinder output from all 47 species
MA_19630g0030 AtHB31, ZHD4, HB31 transcription factor (zf-HD) 0.02 OrthoFinder output from all 47 species
MA_5767g0010 ATHB22, MEE68, ZHD2, HB22 transcription factor (zf-HD) 0.03 OrthoFinder output from all 47 species
MA_97909g0010 HB34, ZHD9, AtHB34 transcription factor (zf-HD) 0.03 OrthoFinder output from all 47 species
Msp_g07276 AtHB31, ZHD4, HB31 zf-HD-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g11371 ATHB22, MEE68, ZHD2, HB22 zf-HD-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g35239 ATHB22, MEE68, ZHD2, HB22 zf-HD-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g26146 AtHB31, ZHD4, HB31 zf-HD-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g02734 AtHB31, ZHD4, HB31 zf-HD-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g02885 ATHB22, MEE68, ZHD2, HB22 zf-HD-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g14429 ATHB22, MEE68, ZHD2, HB22 zf-HD-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0192.g025357 ATHB22, MEE68, ZHD2, HB22 zf-HD-type transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Sam_g10091 No alias zf-HD-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g102980.3.1 AtHB31, ZHD4,... transcription factor (zf-HD) 0.05 OrthoFinder output from all 47 species
Solyc01g150154.1.1 ATHB29, ZFHD1,... transcription factor (zf-HD) 0.06 OrthoFinder output from all 47 species
Solyc01g150155.1.1 Solyc01g150155 transcription factor (zf-HD) 0.07 OrthoFinder output from all 47 species
Solyc02g067330.1.1 MIF2, Solyc02g067330 transcription factor (zf-HD) 0.04 OrthoFinder output from all 47 species
Solyc02g085160.1.1 AtHB24, ZHD6,... transcription factor (zf-HD) 0.03 OrthoFinder output from all 47 species
Solyc02g087970.1.1 MIF2, Solyc02g087970 transcription factor (zf-HD) 0.05 OrthoFinder output from all 47 species
Solyc03g061620.1.1 MIF2, Solyc03g061620 transcription factor (zf-HD) 0.03 OrthoFinder output from all 47 species
Solyc03g098060.3.1 ATHB22, MEE68,... transcription factor (zf-HD) 0.03 OrthoFinder output from all 47 species
Solyc04g014260.2.1 ATHB22, MEE68,... transcription factor (zf-HD) 0.04 OrthoFinder output from all 47 species
Solyc04g074990.3.1 ATHB22, MEE68,... transcription factor (zf-HD) 0.02 OrthoFinder output from all 47 species
Solyc04g080490.4.1 AtHB31, ZHD4,... transcription factor (zf-HD) 0.03 OrthoFinder output from all 47 species
Solyc05g051420.2.1 ZHD3, HB21,... transcription factor (zf-HD) 0.03 OrthoFinder output from all 47 species
Spa_g49192 AtHB31, ZHD4, HB31 zf-HD-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g51193 AtHB31, ZHD4, HB31 zf-HD-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g51319 AtHB31, ZHD4, HB31 zf-HD-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g10143 AtHB31, ZHD4, HB31 zf-HD-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006417 regulation of translation IEP HCCA
BP GO:0009410 response to xenobiotic stimulus IEP HCCA
BP GO:0009740 gibberellic acid mediated signaling pathway IEP HCCA
BP GO:0009743 response to carbohydrate IEP HCCA
BP GO:0009744 response to sucrose IEP HCCA
BP GO:0009886 post-embryonic animal morphogenesis IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010093 specification of floral organ identity IEP HCCA
BP GO:0010264 myo-inositol hexakisphosphate biosynthetic process IEP HCCA
CC GO:0010287 plastoglobule IEP HCCA
BP GO:0010476 gibberellin mediated signaling pathway IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
BP GO:0017148 negative regulation of translation IEP HCCA
CC GO:0031977 thylakoid lumen IEP HCCA
BP GO:0032055 negative regulation of translation in response to stress IEP HCCA
BP GO:0032958 inositol phosphate biosynthetic process IEP HCCA
BP GO:0033517 myo-inositol hexakisphosphate metabolic process IEP HCCA
BP GO:0034248 regulation of amide metabolic process IEP HCCA
BP GO:0034249 negative regulation of amide metabolic process IEP HCCA
BP GO:0034285 response to disaccharide IEP HCCA
BP GO:0043555 regulation of translation in response to stress IEP HCCA
BP GO:0043647 inositol phosphate metabolic process IEP HCCA
BP GO:0046173 polyol biosynthetic process IEP HCCA
MF GO:0046982 protein heterodimerization activity IEP HCCA
BP GO:0048437 floral organ development IEP HCCA
BP GO:0048440 carpel development IEP HCCA
BP GO:0048441 petal development IEP HCCA
BP GO:0048443 stamen development IEP HCCA
BP GO:0048481 plant ovule development IEP HCCA
BP GO:0048507 meristem development IEP HCCA
BP GO:0048827 phyllome development IEP HCCA
BP GO:0051248 negative regulation of protein metabolic process IEP HCCA
BP GO:0080086 stamen filament development IEP HCCA
BP GO:0080149 sucrose induced translational repression IEP HCCA
BP GO:0090701 specification of plant organ identity IEP HCCA
BP GO:0099402 plant organ development IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006456 ZF_HD_homeobox_Cys/His_dimer 30 84
No external refs found!