AT3G28960

Description : Transmembrane amino acid transporter family protein

Gene families : OG0000278 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000278_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G28960

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00252630	evm_27.TU.AmTr_v1...	Solute transport.carrier-mediated transport.APC...	0.03	OrthoFinder output from all 47 species
Dac_g07419	No alias	solute transporter *(AAAP) & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g19618	No alias	solute transporter *(AAAP) & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01031665001	No alias	Solute transport.carrier-mediated transport.APC...	0.07	OrthoFinder output from all 47 species
Gb_00871	No alias	solute transporter (AAAP)	0.03	OrthoFinder output from all 47 species
LOC_Os11g19240.1	LOC_Os11g19240	solute transporter (AAAP)	0.06	OrthoFinder output from all 47 species
Lfl_g25623	No alias	solute transporter *(AAAP) & original description: none	0.03	OrthoFinder output from all 47 species
MA_60453g0010	No alias	solute transporter (AAAP)	0.03	OrthoFinder output from all 47 species
MA_62438g0010	No alias	Amino acid transporter AVT1C OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Tin_g28133	No alias	solute transporter *(AAAP) & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005342	organic acid transmembrane transporter activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005774	vacuolar membrane	IDA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006865	amino acid transport	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
MF	GO:0015171	amino acid transmembrane transporter activity	ISS	Interproscan
BP	GO:0015849	organic acid transport	None	Extended
CC	GO:0016020	membrane	ISS	Interproscan
MF	GO:0022857	transmembrane transporter activity	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
MF	GO:0046943	carboxylic acid transmembrane transporter activity	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0098588	bounding membrane of organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR013057	AA_transpt_TM	15	396

External Links

No external refs found!