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AT3G29000


Description : Calcium-binding EF-hand family protein


Gene families : OG0011018 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0011018_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G29000

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00264300 evm_27.TU.AmTr_v1... No description available 0.01 OrthoFinder output from all 47 species
AT3G47480 No alias Calcium-binding EF-hand family protein 0.1 OrthoFinder output from all 47 species
Aob_g27777 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01011435001 No alias Probable calcium-binding protein CML45 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
LOC_Os07g43800.1 LOC_Os07g43800 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os11g38780.1 LOC_Os11g38780 no description available(sp|q93z27|cml46_arath : 99.8) 0.04 OrthoFinder output from all 47 species
Solyc02g088090.1.1 Solyc02g088090 no description available(sp|q93z27|cml46_arath : 100.0) 0.02 OrthoFinder output from all 47 species
Zm00001e009835_P001 Zm00001e009835 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e010846_P001 Zm00001e010846 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e021222_P001 Zm00001e021222 no description available(sp|q93z27|cml46_arath : 105.0) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding ISS Interproscan
CC GO:0005886 plasma membrane ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0000156 phosphorelay response regulator activity IEP HCCA
BP GO:0002376 immune system process IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004620 phospholipase activity IEP HCCA
MF GO:0004806 triglyceride lipase activity IEP HCCA
MF GO:0005544 calcium-dependent phospholipid binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006638 neutral lipid metabolic process IEP HCCA
BP GO:0006639 acylglycerol metabolic process IEP HCCA
BP GO:0006641 triglyceride metabolic process IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0008970 phospholipase A1 activity IEP HCCA
BP GO:0009270 response to humidity IEP HCCA
BP GO:0009611 response to wounding IEP HCCA
BP GO:0009612 response to mechanical stimulus IEP HCCA
BP GO:0009626 plant-type hypersensitive response IEP HCCA
BP GO:0009627 systemic acquired resistance IEP HCCA
BP GO:0009692 ethylene metabolic process IEP HCCA
BP GO:0009693 ethylene biosynthetic process IEP HCCA
BP GO:0009696 salicylic acid metabolic process IEP HCCA
BP GO:0009697 salicylic acid biosynthetic process IEP HCCA
BP GO:0009743 response to carbohydrate IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010185 regulation of cellular defense response IEP HCCA
BP GO:0010186 positive regulation of cellular defense response IEP HCCA
BP GO:0010200 response to chitin IEP HCCA
BP GO:0010214 seed coat development IEP HCCA
BP GO:0010243 response to organonitrogen compound IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016298 lipase activity IEP HCCA
BP GO:0018958 phenol-containing compound metabolic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019433 triglyceride catabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0031349 positive regulation of defense response IEP HCCA
BP GO:0033037 polysaccharide localization IEP HCCA
BP GO:0034050 programmed cell death induced by symbiont IEP HCCA
BP GO:0042537 benzene-containing compound metabolic process IEP HCCA
BP GO:0043449 cellular alkene metabolic process IEP HCCA
BP GO:0043450 alkene biosynthetic process IEP HCCA
BP GO:0044403 biological process involved in symbiotic interaction IEP HCCA
BP GO:0045793 positive regulation of cell size IEP HCCA
BP GO:0045926 negative regulation of growth IEP HCCA
BP GO:0046189 phenol-containing compound biosynthetic process IEP HCCA
BP GO:0046461 neutral lipid catabolic process IEP HCCA
BP GO:0046464 acylglycerol catabolic process IEP HCCA
BP GO:0046503 glycerolipid catabolic process IEP HCCA
MF GO:0047714 galactolipase activity IEP HCCA
BP GO:0048445 carpel morphogenesis IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051702 biological process involved in interaction with symbiont IEP HCCA
BP GO:0052542 defense response by callose deposition IEP HCCA
BP GO:0052545 callose localization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0120251 hydrocarbon biosynthetic process IEP HCCA
BP GO:0120252 hydrocarbon metabolic process IEP HCCA
BP GO:0120254 olefinic compound metabolic process IEP HCCA
BP GO:0120255 olefinic compound biosynthetic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1900673 olefin metabolic process IEP HCCA
BP GO:1900674 olefin biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901698 response to nitrogen compound IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 125 190
No external refs found!